Rhizorhabdus dicambivorans: CMV14_11235
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Entry
CMV14_11235 CDS
T05084
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rdi
Rhizorhabdus dicambivorans
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rdi03032
]
CMV14_11235
03036 Chromosome and associated proteins [BR:
rdi03036
]
CMV14_11235
03400 DNA repair and recombination proteins [BR:
rdi03400
]
CMV14_11235
DNA replication proteins [BR:
rdi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CMV14_11235
Chromosome and associated proteins [BR:
rdi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CMV14_11235
DNA repair and recombination proteins [BR:
rdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CMV14_11235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
GTP_EFTU_D2
MSP1_barrel
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
ATE64904
UniProt:
A0A2A4G2D2
LinkDB
All DBs
Position
2373978..2374250
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQELIGTVAEATGMTKNDASKAVEAVFDSITGQLKKGDEVRLVGFGTFSVSKRKASTG
RNPRTGEPMKISASSQPKFKPGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaggagcttatcggcaccgtcgccgaagcgaccggcatgaccaagaatgat
gcttccaaggcggtggaagcggtgttcgattcgatcacgggacagctcaagaagggtgac
gaggtgcgtctcgtcggcttcggcactttttcggtcagcaagcgcaaggcgtccaccggc
cgcaatccgcgtacgggcgagccgatgaagatcagcgcgtcgagccagcccaagttcaag
cccggcaagggcctcaaggacgccgtcaactaa
DBGET
integrated database retrieval system
