Rhizorhabdus dicambivorans: CMV14_12915
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Entry
CMV14_12915 CDS
T05084
Name
(GenBank) conjugal transfer protein TraG
Organism
rdi
Rhizorhabdus dicambivorans
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ATE65198
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Position
2725605..2727596
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AA seq
663 aa
AA seq
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MSATKILWGQIAIVFLIVLLTTWAATQYVAWSLGFQAQLGAPWFSLFGLPIYYPPAFFWW
WYFYDAYAPEVFAKGGMISASGGFIAIAVAIGMSVWRAREAKSAATYGSARWAGKDEVKA
AGLLSPDGVVLGRYDRDYLRHDGPEHVLCFAPTRSGKGVGLVVPSLLTWPGSAIVHDIKG
ENWQLTAGFRARHGRVLLFDPTNPKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLE
KRNHWEKTSHALLVGAILHVLYAEDDKTLAGVAAFLSDPKRPIESTLAAMMKTSHLGEAG
PHPVVASAARELLNKSDNERSGVLSTAMSFLGLYRDPVVAEVTRRCDWRISDMVGGKLPT
TLYLVVPPSDINRTKPLIRLILNQVGRRLTEDLQAKAGRHRLLLMLDEFPALGRLDFFES
ALAFMAGYGLKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTA
TEMKAMQNYAGHRLSPWLGHLMVSRSETARQLLTPGEIMQLPPSDEIVMVAGTPPIRAKK
ARYYEDARFKERIMSPPGLARPAEGRPDDWSKLPTPARPDMTENAAPTTSGDDEEDSTES
ERRHQPELNRVNPIEKKAPIDNEFEIDLPDDTEDAAARNQRLTRVMRGVARQVSLDPNDG
MEL
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgaccaaaatcctgtggggccagatcgccatcgtcttcctcatcgtactgctc
accacttgggcggcgacgcaatatgtcgcatggagcctcggctttcaggcgcagctcggc
gcgccctggttttccctgttcggcttgccgatctactatccgccggcgttcttctggtgg
tggtatttctacgacgcctacgcgccggaggtcttcgccaagggcgggatgatctcggcg
tcgggcggcttcatcgccatagccgtcgccatcggcatgtcggtctggcgcgcccgcgaa
gcgaaaagcgctgcgacctacggctccgcccgctgggccggaaaggacgaggtgaaagcc
gcgggcctgctcagtcccgacggtgtcgtgctcggccgctatgatcgcgactatctccgt
catgacggccccgagcatgtgctttgcttcgccccgacccgatcgggcaagggcgtcggc
ctggtcgtgccgtccctgttgacctggccgggctcggccatcgtccacgacatcaaaggg
gaaaactggcagctcaccgccggtttccgcgcccggcacggccgcgttctgctgttcgac
ccaaccaaccccaaatcgtcggcctacaatccgctgctcgaggtgcgccgcggcgaatgg
gaagtccgcgacgtccagaacatcgccgacatcctggtcgatcccgaaggctcgctcgaa
aagcggaaccattgggagaagaccagtcatgccctgctggtcggcgccatcctgcatgtg
ctctacgccgaggacgacaagacattggccggcgtcgccgctttcctgtccgatccaaag
cgcccgatcgagtcgacgcttgccgcgatgatgaagaccagccacctcggcgaggcaggg
ccgcaccccgtcgtcgccagcgccgcgcgcgagctgctcaacaaatcggacaacgaacgc
tcgggcgtgctctccaccgccatgtcgtttctcggcctctaccgcgatcctgtcgtcgcc
gaggtgacgcggcgctgcgactggcggatcagcgacatggtgggcggcaagctcccgacc
acgctctaccttgtcgtgccgccgtccgacatcaaccgcaccaagccgttgatacgcctg
atcctcaatcaggtcggccgccgtctcaccgaggatctgcaagcgaaggccgggcggcat
cgcctgctgctcatgctcgacgagtttcccgccctcggccgcctcgatttcttcgagtcc
gcgctggccttcatggcgggctacggtctcaagagctttctgatcgctcaatcgctgaac
cagatcgagaaggcttacggcccgaacaactcgatcctcgacaactgccatgtgcgcgtt
tcctttgcgacgaacgacgaaaggaccgcgaagcgggtcagcgacgcgctcggaaccgcg
accgagatgaaggcgatgcagaattacgccgggcatcggctctcgccctggctcggtcat
ttgatggtatcgcgctcggagaccgcgcgacagctcctgacaccaggcgagatcatgcaa
ctcccgccgagcgacgagatcgtcatggtcgccgggacgccgccgatccgggcgaagaag
gcccgctactatgaagatgcccgcttcaaggaacgcatcatgtcaccgccggggctggcg
cggcctgctgaaggtcggcccgacgattggagcaagctgccgacccccgcgcgcccggac
atgaccgaaaacgctgcgccaacgaccagcggtgacgatgaagaggattccaccgagtcc
gagcgtcggcatcagcccgaactcaaccgggtgaaccccatcgaaaagaaggcgccgatc
gataatgagtttgagatcgacttgcctgacgacacagaggacgcagccgcgcgcaaccag
cggctgacccgcgtcatgcgcggcgttgcccgccaggtctcgctcgatcccaatgacggc
atggagttgtag
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