Rhizorhabdus dicambivorans: CMV14_15230
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Entry
CMV14_15230 CDS
T05084
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rdi
Rhizorhabdus dicambivorans
Pathway
rdi00330
Arginine and proline metabolism
rdi00480
Glutathione metabolism
rdi01100
Metabolic pathways
rdi01110
Biosynthesis of secondary metabolites
rdi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
CMV14_15230
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CMV14_15230
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
CMV14_15230
Enzymes [BR:
rdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
CMV14_15230
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF7217
Motif
Other DBs
NCBI-ProteinID:
ATE65588
UniProt:
A0A2A4FX11
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All DBs
Position
3221054..3222247
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AA seq
397 aa
AA seq
DB search
MHKHHSALGLAESLRPVQPVTLLRPHAAARAARFFVEKFQGRSMYAVKANPSPELIQILW
DNGITHFDVASIAEVRLVHGVAPQATLCFMHPVKAEEAIAEAYSVYGVRTFSLDSIEELE
KIERATQGATDLTLCVRMRVSSEMSKLSLASKFGVELTDAKELLQRTRQVADALGICFHV
GSQAMSPSAYVQAMEKVRAAIVSAAVTVDVIDVGGGFPSVYPGMEPPALEAYFGAIHQAF
ESLPVSYSSELWCEPGRALCAEYASLLVRVERRRGDELYINDGAYGALFDAAHIGWRFPV
KLLREPESKAREIGFSFYGPTCDDMDHMAGPFHLPADVQPGDYIEIGMLGAYGCAMRTGF
NGFTAGDRVIMDDEPMATLYVRDEEAREAVSSNVIKL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
ttgcacaagcatcatagcgcgctggggctagctgagtcccttcggccggttcagccggtc
acgctccttcgtccccacgccgctgcgcgggctgcccggttcttcgtcgagaagttccag
gggcgctcgatgtatgccgtcaaggcgaatccgtcgcccgaactgatccagatcctctgg
gacaacgggatcacccatttcgacgtcgcgtcgatcgccgaagtgcgcctcgtccatggc
gtcgcgccacaggcgacgctgtgcttcatgcacccggtcaaggccgaggaagcgatcgcc
gaggcctattcggtctatggcgtgcgcaccttctcgctcgattcgatcgaggaactggag
aagatcgagcgcgccacccagggcgcgaccgacctgacgctgtgcgtccggatgcgcgtc
tcgtcggagatgtcgaagctcagcctggcatccaagttcggggtcgagctgaccgacgcc
aaggaactgctccagcgcacccgccaggtcgccgatgcgctcggcatctgcttccatgtc
ggcagccaggcgatgagcccgtcggcctatgtccaggcgatggagaaggtccgcgccgca
atcgtctctgcggcggtcaccgtcgacgtgatcgacgtcggcggcggcttcccctcggtc
tatccgggcatggagccgcccgcgctcgaagcctatttcggcgcgatccaccaggcgttc
gaaagcctgccggtttcctattcgtccgagctgtggtgcgagcccggccgcgcgctgtgc
gccgaatatgccagcctgctggtccgcgtcgagcgacgccgcggcgacgagctgtacatc
aacgatggcgcctatggggcgctgttcgatgccgctcacatcggctggcgcttcccggtg
aagctgctgcgcgaaccggaatcgaaggcgcgcgagatcggcttcagcttctacggcccg
acctgcgacgacatggaccatatggcgggccccttccacctgcccgccgacgtccagccc
ggcgactatatcgagatcggcatgctcggcgcctatggctgcgcgatgcgcaccggcttc
aacggcttcaccgccggggaccgggtgatcatggacgacgagccgatggcgacgctgtat
gtccgcgacgaagaggcccgcgaggcggtttcgtcgaacgtcatcaagctgtaa
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