Rhizorhabdus dicambivorans: CMV14_16320
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Entry
CMV14_16320 CDS
T05084
Symbol
traA
Name
(GenBank) Ti-type conjugative transfer relaxase TraA
Organism
rdi
Rhizorhabdus dicambivorans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MobA_MobL
AAA_30
AAA_19
Viral_helicase1
SH3_13
AAA_11
TraI_hel_assoc_N
PIF1
Herpes_Helicase
AAA_22
UvrD_C_2
PhoH
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ATE65767
UniProt:
A0A2A4FSM1
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All DBs
Position
3468377..3471262
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AA seq
961 aa
AA seq
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MAIFHLSVKVISRSSGRSAVAAAAYRGAERLHDERLNRDHDFTNKDGVVHSEVLLPEGAP
EEFADREKLWNAVEAAEKRNDAQLAREVEFAIPRELTKEQGIELAREFAEAEFVEKGMIA
DLNVHWDIGADGQPKPHAHVMLTMREVGKDGFGAKVRDWNKAELVEQWRERWAEHVNQRL
AELDIDARIDHRSLEAQGIALEPQDKIGPAASRMGVRGLEAERIEEHRAVAQRNGERIIA
NPNVALDAITHSQATFTGRDLAMFVHRHSDGKEQFDLAMSAVRGSSDLIALGKDGRGEER
FTSRQMIETEQRLGRASELLAERERHQVEDRGREGALARAAERGLMLSGEQRAAFEHVTD
GRGLSVVVGYAGTGKSGMLGVAREAWEGAGYTVRGAALSGIAAEGLEHGSGIASRTIASL
EHQWGQGRELLTSRDVLVIDEAGMVGTRQMERVLSHAADAGAKVVLVGDPQQLQAIEAGA
AFRSIHERHGGVEISEVRRQHDGWQQDATRHLATGRTGFAIQAYDERGMVHAAETREAAR
GELIERWDRDRQASPGDTRIILTHTNDEVRELNDAAREKLRASGELGNDVSISATRGERQ
FASGDRIMFLRNERGLGVKNGTLGTVEQVTPQRMAVRTDDGRNVAFDTKDYAHIDHGYAA
TIHKAQGMTVDQVHVLATPGMDSHGAYVAMSRHRDGLALHYGRNDFADQSKLVRTLSRER
GKDMACDYKPEQQFAERRGITFRKRIVEIARQLPERAKSIFAGFRPQANRLEPLPTEQAG
LSDQRRAVERYARAAADIGQMREQGLPVLPHQSDALEKAGKALDAIRPHGTADLASALQR
QPSLAREAADGRSQGAIRAMQLEAEIRVDPAQRADRFVSDWQRLGQARQVMQRDGDSKGA
QRLTNRMTDLVKGLERDAQVESLLRSRTRELGIKTELGRDLARDLAASISMERSRSIGMG
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcttccacctctccgtcaaagtcatcagccggtcgagcgggcgcagcgccgtg
gcggcagcggcctatcgcggggccgagcggctgcacgacgaacggctcaaccgtgaccat
gacttcaccaacaaggacggcgtcgtccattccgaagtgctgctgccggaaggcgcgcca
gaggaatttgccgaccgcgaaaagctctggaatgccgtcgaggctgcggagaaacgcaat
gacgcgcagcttgcccgcgaggtcgaattcgccattccgcgcgagctcaccaaggaacag
ggaatcgagttggcgcgcgagtttgccgaggccgagttcgtcgaaaagggcatgatcgcc
gacctcaatgtccattgggatattggcgcggacggccagcccaagccccacgcccatgtc
atgctcaccatgcgcgaagtcggcaaagacgggttcggcgcgaaggtgcgcgactggaac
aaggccgaactggtcgagcagtggcgcgaacgctgggccgagcatgtcaaccagcgcctg
gcagaactcgatatcgacgcgcggatcgatcaccgcagcctggaggcgcagggcatagcg
ctggagccgcaggacaagatcggccccgccgcatcgcgcatgggcgtgcgcgggcttgag
gcagagcggatcgaggaacaccgcgccgtcgcgcagcgtaatggcgagcggattatcgcc
aatcccaacgtcgcgctcgacgcgatcacgcacagccaggccaccttcacgggccgcgat
ctggcgatgtttgtgcatcgacacagcgacgggaaagagcagttcgatttggcgatgagc
gcggttcgcggatcatccgacctgatcgcactgggcaaggacggacgcggcgaggagcgg
ttcacatcgcgccagatgatcgaaaccgagcagcggctcggtcgcgcatcggaattgctg
gcagaacgcgagcggcatcaggtcgaagatcgtggccgggaaggagcgctggcgcgggca
gcggaacgcggcttgatgctgtccggcgagcagcgtgcggcgttcgagcatgtgaccgac
gggcgcggcctcagcgttgtcgtcggctatgccgggaccggcaagagcgggatgctgggc
gtggcgcgcgaggcgtgggaaggcgcagggtataccgttcgcggtgcagcgctgtctggc
atcgccgccgaggggctggagcacggttcgggcattgcctcgcgcaccattgccagcctt
gagcaccagtggggccaaggccgcgaattactcacgtcccgtgacgtgctggtgatcgat
gaggcaggcatggtcggcacacgccagatggagcgcgtcctctcccatgccgccgatgcg
ggtgcgaaagttgtcctggttggcgacccgcagcagctccaggccatcgaagcaggcgct
gcgttccggtcgatccacgaacggcacggcggcgtcgaaatcagcgaggttcgccgccag
catgacggctggcagcaggacgccacgcggcaccttgctaccgggcgcaccggttttgcc
attcaggcctacgacgaacgcggcatggtgcacgccgccgaaacgcgggaggccgcacgc
ggcgaactgatcgagcgctgggatcgtgaccggcaggccagccccggcgatacgcgaatc
atcctcacccataccaacgacgaagtgcgggagctcaatgacgcggcacgagaaaagttg
cgagccagtggcgagctgggcaacgacgtgtcgatcagcgcgacacgcggagagcgtcag
ttcgccagcggcgaccgcatcatgttcctgcgcaatgagcggggcctgggcgtcaaaaac
ggcacactcggcactgtagaacaggtgacgccgcagcgcatggccgtgcgcaccgacgat
ggccgcaacgtggctttcgacaccaaggattatgcgcatatcgatcatggctacgccgcc
acgatccacaaggcgcagggcatgaccgtggaccaggtgcatgtgctggcgacaccgggc
atggacagccacggtgcctatgtcgcgatgtcccgccaccgtgacggcctcgccctacat
tatgggcgcaacgattttgccgatcagtcgaaacttgtccgtacgctgagccgcgagcgt
ggcaaggacatggcctgcgactacaagcccgagcagcagtttgccgaacggcgcgggatc
accttccgcaagcgtatcgtggagattgcgaggcagttgccggagcgcgcgaagtcgatc
tttgctggcttccgccctcaggccaaccggctcgaaccgctgcccaccgaacaggctggc
ctgtccgatcagcggcgggcggtcgaacgctatgcgcgtgccgccgctgacatcgggcag
atgcgcgagcaaggattgccggtcctgccacatcagagcgacgcgctggagaaggccgga
aaggcgctcgacgcgatccggccccatggcacagccgacctcgccagcgccttgcagcgc
cagccctcgctcgcccgtgaggccgccgatggtcgcagccagggtgcaatccgcgccatg
cagctcgaagccgaaatccgcgtcgatcccgcgcagcgtgcagaccgctttgtcagcgac
tggcagcggcttgggcaggcgcgccaggtcatgcagcgcgatggcgacagcaagggcgcg
cagaggctcaccaaccgcatgacggatttggtgaaggggctggagcgcgacgcgcaggtc
gaatccctgctgcgcagtcgcacccgcgagcttggcatcaagacagaactcggtcgcgat
ctggcccgcgaccttgccgcctccatctcgatggagcggagccggtcaatcggcatgggc
ctgtag
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