KEGG   Rhizorhabdus dicambivorans: CMV14_17475
Entry
CMV14_17475       CDS       T05084                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
rdi  Rhizorhabdus dicambivorans
Brite
KEGG Orthology (KO) [BR:rdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rdi03032]
    CMV14_17475 (parE)
   03036 Chromosome and associated proteins [BR:rdi03036]
    CMV14_17475 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rdi02048]
    CMV14_17475 (parE)
Enzymes [BR:rdi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CMV14_17475 (parE)
DNA replication proteins [BR:rdi03032]
 Prokaryotic type
  DNA Topoisomerases
   CMV14_17475 (parE)
Chromosome and associated proteins [BR:rdi03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    CMV14_17475 (parE)
Prokaryotic defense system [BR:rdi02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    CMV14_17475 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: ATE65975
UniProt: A0A2A4FZC8
LinkDB
Position
3718559..3720547
AA seq 662 aa
MSDDDLFASAPSTSSGSYDASQIEVLEGLEPVRRRPGMYIGGTDERAYHHLAAEVLDNAM
DEAVAGHANRIEVSLQPGNRLTIIDNGRGIPVDPHPKFPKQSALEVILTTLHSGGKFDGK
AYATSGGLHGVGVSVVNALSTETVIEVARNKELFRQRFSRGHAVSKLEKLGAAPNRRGTS
VSFSPDPEIFGASAHFRPGRLMRLARSKAYLYAGVEIRWKCDPSLIGDDTPSEAVFQFPG
GLADHLKEQIGGRECATSQFFTGKQVFPGENNGQVEWAVAWPLWSEGSYSYYCNTIPTPD
GGTHEAGLRAALVKGIRAFADLVGNKRAKDVTADDIVTGSEQMLSVFIRDPQFQSQTKDR
LTSPDAARLVENAIRDHFDHFLADNMERGKALLAFVLDRMDDRLRRKAEKEIKRKTATSG
RKLRLPGKLTDCANDSPEGTEIFIVEGDSAGGSAKQARDRKTQAVLPIRGKILNVASANS
AKIGANQEIADLIQALGCGTRDKCNVDLLRYERVVIMTDADVDGAHIATLLMTFFFQEMP
DLVREGHLYLAQPPLYRLTVGSKSLYAMDDAHRAEIEAKEFKGKKVEVARFKGLGEMNPQ
QLRETTMDPKTRTMLRVTLPQEYEERASVRDLVDRLMGKNPEHRFAFIQANAATVDEEVI
DA
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgtccgacgacgatctcttcgcctccgctccgtccaccagctccggcagttacgacgcc
tcgcagatcgaggtgcttgaggggctggagcccgtgcgccgccgccccggcatgtatatc
ggcggcaccgacgagcgcgcctatcaccatctcgccgccgaagtgctcgacaatgcgatg
gacgaggcggtcgccggccatgccaatcggatcgaggtgtcgctccagcctggcaaccgg
ctgacgatcatcgacaatggccgcggcatcccggtcgatccacatcccaaattcccgaag
cagtcggcgctggaggtgatcctcaccacgctccactctggcgggaagttcgatggcaag
gcctatgcgacctcgggcggactgcacggcgtcggcgtgtcggtggtcaacgcgctgtcg
accgagacggtgatcgaggtggcgcgcaacaaggagctgttccgccagcgcttctcgcgg
ggccatgcggtgagcaagctcgagaaactgggcgccgcccccaaccggcgcggcaccagc
gtctccttctcccccgatcccgagattttcggcgccagtgcgcatttccgcccaggcagg
ctgatgcggctcgcccgttccaaggcctatctctatgcaggggtcgagatacgctggaaa
tgcgacccctcgctgatcggcgacgataccccttcggaggcagtgtttcagtttcccggc
ggcctcgccgaccatctcaaggagcagatcggcggtcgcgaatgcgcgaccagccagttc
ttcaccggcaagcaggtctttccgggcgaaaataacgggcaggtcgaatgggcggtggcc
tggccgctctggtccgaaggctcgtacagctattattgcaacaccatcccgacccccgat
ggcggcacccatgaggcgggcctgcgcgcggcgctggtcaaaggcatccgcgccttcgca
gacttggtgggcaacaagcgcgccaaggatgtcacggccgacgacatcgtcaccggctcc
gaacagatgctgtcggtgttcatccgcgatccgcagttccagagccagaccaaggaccgg
ctcacctcacccgacgccgcgcgcctcgtcgagaatgcgatccgcgatcatttcgaccat
ttcctcgccgacaatatggagcgcggcaaggcgctgctcgccttcgtgctcgatcgcatg
gacgatcgcctgcgccgcaaggcggagaaggagatcaagcgcaagaccgcgacctcgggc
cgcaagctgcgcctgcccggcaagctcaccgactgcgccaatgactcgcccgagggcacc
gaaatcttcatcgtcgagggcgacagcgccggcggctcggcgaagcaggcgcgcgaccgc
aagacccaggcggtgctgccgatccgcggcaagatcctcaacgtcgcctcggccaacagc
gccaagatcggcgcgaaccaggagattgccgacctgatccaggcgctcggctgcggcacc
cgcgacaagtgcaatgtcgatctgctgcgctacgaacgcgtcgttatcatgaccgacgcc
gatgtcgacggcgcgcatatcgcgaccctgctgatgaccttcttcttccaggagatgccc
gatctggtgcgtgaggggcatctctacctggcccagccgccgctctaccgcctgaccgtc
ggcagcaagagcctctacgcgatggacgacgcccaccgcgccgagatcgaggcgaaggag
ttcaagggcaagaaggtcgaggtggcgcgcttcaagggcctcggcgagatgaacccgcag
cagctgcgcgaaacgacgatggacccgaagacccgcaccatgctgcgcgtcaccctgccc
caggaatatgaggaacgcgccagcgtccgcgatctcgtagaccggctgatgggcaagaac
cccgagcatcgcttcgccttcatccaggccaatgcggcgacggtggatgaagaggtcata
gatgcctga

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