Rhizorhabdus dicambivorans: CMV14_17785
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Entry
CMV14_17785 CDS
T05084
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
rdi
Rhizorhabdus dicambivorans
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rdi02000
]
CMV14_17785
Transporters [BR:
rdi02000
]
Other transporters
Pores ion channels [TC:
1
]
CMV14_17785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
GLYCAM-1
Motif
Other DBs
NCBI-ProteinID:
ATE66027
LinkDB
All DBs
Position
3780306..3782258
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AA seq
650 aa
AA seq
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MPSAHPSPPRGTTCFPWVDVATERRASRIRGHPGRGAGNMPSIVRLRVPVRLCTRTAILA
VLSCWTGTGMALDLNSMSIEELAQIEVTSVTKSAQPLSEAPSAIYVITREEILRSGAPNL
PEMLRLAPNLQVAQTSASQYAITARGFSGSPAAQNFANKLLVLIDGRSVYTPLYSGVYWD
MQDILSEDVDRIEVISGPGATLWGANAVNGVINIITRPSDATQGAVLSANGGSNERSVGF
RYGGKASEALSYRVYVRGYEDDQTRTAAGVPAQDGWSRVQGGFRVDWEASAQDSLTVQGD
LYDGDRSQFGAPDEDIEGRNLLTRWNRGFADDSALQVQLYYDRTERKSGGGGGGFSFETY
DLDVQHSFALGTRHDLVVGSGVRVSRYDIVGNFALDFEPAKRTLRLANAFVQDSIRISDA
VRLVLGLKIEDYPYAASALLPNVRLSVRLGESTMVWAAASRAVRSPTPFDRDVRERIGTT
LFLIGGPDFTTEKLTAFELGGRAQPSERLSLSASAFYNRYDDLRSAEFNLLTLLPLEWGN
MIRGRTYGVEAWGSYGVTPWWKLSAGVNVLKERFRFKPDATALLLPGLPGVEQQGNDPEF
QASIKSAMNLGSRATIDLALRHVGRRPLPRVSSYVELDAHVAVDLAPGCS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgccatcggctcatccgtccccgccccggggaactacgtgttttccgtgggttgatgtc
gctacggaacgccgtgcatcccgcattcggggacatccaggcaggggggctgggaatatg
ccgtcgatcgtccgtctgcgggtccccgtacgcctctgcacgcgcacggcgatattagcg
gtgctttcatgctggaccggcaccggaatggcgctcgacctcaacagcatgtcgatcgag
gaacttgcccagatcgaggtcacgtcggtcaccaagagcgcccagccgctgagcgaggcc
cccagcgccatctatgtcatcacccgcgaggaaatcctccgctccggtgcgcccaatctg
cccgagatgcttcgcctcgcccccaacctgcaggtcgcccagaccagcgcgagccaatat
gccatcaccgcgcgcggcttcagcggcagcccggcggcacagaatttcgccaacaagctg
ctggtgctgatcgacggccgcagcgtctataccccgctctattccggggtctattgggac
atgcaggatatcctgtccgaggatgtcgaccgcatcgaggtgatcagcgggccgggggcg
acactgtggggcgccaatgccgtcaatggcgtgatcaacatcatcacccgcccctcggat
gcgacccagggcgcggtgctgagcgcgaatggcggatccaacgaacgcagtgtgggcttt
cgctatggcggcaaggcgagcgaggcgctgtcctaccgcgtctatgtgcgcggctatgag
gacgaccagacacgcacggcggccggcgttccggctcaggatggatggtcgcgcgtgcaa
ggcggcttccgcgtcgactgggaggcatcggcgcaggactcgctgaccgtgcagggcgac
ctgtacgatggcgaccgcagccagttcggcgcgccggacgaggatatcgaggggcgcaac
ctgctcacccgctggaatcgcggcttcgccgacgattcggcgctgcaggtccagctctat
tatgaccggaccgaacggaagagcggcggaggcggaggcggcttcagcttcgaaacctat
gatctcgacgtccagcacagcttcgcactcggcacacgccacgatctggtggtgggcagc
ggcgtgcgcgtcagccgctacgacatcgtcggcaatttcgcgctcgacttcgaaccggcc
aagcggacgctccgcctggccaacgccttcgtgcaggacagcataaggatcagcgatgcc
gtgcgccttgtcctgggcctgaagatcgaggattacccctatgcggcttccgcgctgctg
cccaatgtgcggctttccgtccggctgggcgagagcacgatggtctgggccgccgcatcg
cgcgcggtccgctcgcctacgccgttcgaccgcgatgtccgcgagcggatcgggacgacc
ctgttcctgatcggcggccccgatttcaccaccgagaagctcaccgccttcgagctgggc
ggccgggcgcagcccagcgagcggctctccctctccgcctcggcattctacaaccgctat
gacgacctgcgcagcgcggagttcaatctcctcacgctattgccgctcgaatggggcaat
atgatccgcggccgcacctacggagtcgaagcctggggcagctacggcgtcaccccctgg
tggaagctgtcggcaggagtgaacgtgctgaaggagcgcttcaggttcaagccggacgca
accgcgctgctgttgccgggcctgcccggggtggagcagcagggcaatgatccggaattc
caggcgtcgatcaaatcggcaatgaacctggggtcgcgtgcgacgatcgaccttgcgcta
cgccatgtcggccgcaggccgctgccgcgggtctcttcctatgtcgaactggacgcacat
gtcgccgtcgacctcgcccccggctgcagttga
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