Rhizorhabdus dicambivorans: CMV14_17995
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Entry
CMV14_17995 CDS
T05084
Name
(GenBank) helicase
Organism
rdi
Rhizorhabdus dicambivorans
Brite
Spliceosome [BR:
rdi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
CMV14_17995
Complex C
U4/U6.U5 tri-SnRNP related factors
CMV14_17995
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GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
AAA_34
Motif
Other DBs
NCBI-ProteinID:
ATE66061
UniProt:
A0A2A4FUZ7
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All DBs
Position
3826455..3829775
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AA seq
1106 aa
AA seq
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MFDPVTIDLISRAPPLGDLDFSELPQRFTNAFAEIVAARVRLRGVASLEQRGEAVTELLA
EMGRLAAAQELLVATAPERADRASAAFVAGTALQLCLMAETVVADGAPRFSSINAIHADH
DICATLLFLIADSQSDAAEMAKRLKRPDGDLGAEGRLVTAIGNLASGRLREVIASQVDEE
NFEFYDPPSDTSASGVAVEALLRRLHAGVIQLARELLVAPREGVTADTVPESRRIFAQVR
DLSIAAIDDVFDEEGPQVFSAFPGPLHVAKLLLAVSGDLVEAALCRVPAPDGVDPGSWWQ
IIRRAARKRPYLWRNHREALEKGYLAKGVSAAVSFPTGGGKSTLAELKIAAALLGGGQVV
VLAPTLALVDQTAFTLGNAFKDYTVFGDLDDEITFSDVLELPEIIVTTPERCLVLQSIQP
EAFAEVALVVFDECHLLHPRESDRSRRSIDAMLCILNLTSYAPHADLLLVSAMMQNAGEM
AGWVAELTGRPCLPLDLAWKPTRQARGCVAYEDARITELHELLATEQLTATTKGVPKHVA
SRLDASPFAFFCLRQTWATRSRDDYALMALLDDAVPFATGVSEKSGEWYMTPNGNVVAGT
IAAAAAEDGLKTLTFVQSTVAAESTVRHFRSLLPKRRVVLNEEEQSWRKLVEEEMGGPQH
CYLKLDTSGQVDGSATSHHGQLLKPERMLHESLFKRRDGVDALFATSTLAQGMNLPSDVV
LIAGDSRWDVSDDKFKQLDAHELLNAAGRAGRAGEGGQGFVLVVPSKIINIDDDDNTINR
HWMSLQSIFSQSDQCLKIDDPITGLLDRIHMQTHDGNEDYFLARLPVGEDGTPDEPAKAM
IRRSFAAYRKRQEGKAEWIESRIDAALARREELAPKKDLTWLERVAASAGLPYEVVTSLA
ELIEAGAFDGDSTDCMNTLFDWVEAHPAWLMHLIRPNDIEGLFGKDYRAIAGNAAKAKVA
LPQIRPLLTAWMAGKPLCELERAIGTKEHLIKTCETARHFAVRLVPDLAFVAGLPARILA
AKAVAAGEEPAIPIVLQTLSGVVRKGCASPEQLANAVHLKSESRPSARARFAEIQHYISA
SDLFASFESVLDRVRQAHAIAMFDDL
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcctgtcacgatcgatctgattagtcgcgcgccaccgcttggcgacctcgac
ttttccgagctgccgcaacgcttcacaaacgccttcgcagagatcgtggcggcgcgagtc
cggttgcgcggtgtcgcgagccttgaacagcgcggcgaagccgtcactgaactcctcgct
gaaatgggacgcctggcggcggcgcaggaactgctcgttgccaccgcgcccgagcgtgcc
gaccgagcgtcagcagcgttcgtggccggcactgccctccagctgtgccttatggccgaa
accgtcgttgcggacggcgcaccgcgcttttccagcataaacgcgatccatgccgatcat
gatatttgcgcgacgctgctgttcctgattgcggattcgcagagtgacgctgccgagatg
gccaagaggctcaagcgcccggatggcgatctgggcgctgaagggcgactggtgacggcg
atcggcaaccttgcctccggccgcttgcgcgaggtgattgccagccaggtcgatgaggag
aattttgaattctatgacccgccgtccgatactagcgcgagcggtgtcgctgtggaggcg
ttgctgcgtcggcttcacgcaggtgtgatccagctcgcgcgtgagcttctagtcgcacca
cgcgagggcgttactgcggataccgtccctgaatcgcgccgcatctttgcccaggttcgt
gacctgtccatcgcggcaattgatgacgtgttcgacgaggaaggtccccaggtcttcagc
gccttccctggtccgctacatgtagcaaagttgctgctggcggtgtcgggcgatctggtc
gaggcagcattgtgccgagttcccgcgccggacggtgttgatcctggatcatggtggcag
atcatccgtcgtgccgcgcgcaagcgtccctatctctggcgaaatcaccgggaggcgctg
gagaaaggctatctcgcgaagggtgtgtccgctgcggtcagcttcccaaccgggggcggc
aagtcgacactggccgaactcaaaatcgcggcggcgctgctcggcggcggtcaggtggtg
gtgctcgcgccgacactggcactggttgaccagactgccttcacgctcggcaatgcattc
aaggactacaccgtcttcggtgaccttgacgacgagatcaccttttccgacgtactcgag
ttgccagagatcattgtcaccacgcctgagcggtgtcttgtgctgcagtcgatacaaccg
gaagcgttcgcggaagtcgcgcttgtggtgttcgatgagtgccatcttctccatccacga
gaatccgatcgcagccggcggtcgatcgacgcgatgctgtgcatcctcaatctcaccagc
tatgcgcctcacgccgatctactacttgtatcggccatgatgcagaacgctggagagatg
gccggatgggtggcagagctcaccggtcgtccgtgcctcccgctggatctcgcctggaag
cccacccgccaagcccgcggctgcgtggcctatgaagacgcgcgtattactgaactccac
gagcttctagccacggagcaacttaccgcgaccaccaagggcgttcccaagcatgtcgca
agccgccttgatgcgtcgcccttcgccttcttctgcctacggcagacatgggcgacccgt
agtcgtgacgactacgcgctgatggcgctgctcgacgacgctgtgccttttgctaccggt
gtgtccgagaagtctggcgaatggtatatgactccgaatgggaacgtcgtcgcagggacg
atcgcagcggctgcggccgaagacggcctcaagaccctgacctttgtgcaaagcactgtc
gccgctgaatccactgtccgtcattttcgtagcttgttgcccaagcgccgcgttgtgctc
aacgaggaggagcaaagctggcgcaaactggtcgaagaggagatgggcgggccacagcac
tgctacctcaagttggacacctccggacaggtcgatgggagcgcgaccagtcaccacggc
cagttgctgaaacccgaacgtatgttgcacgagtcgctgttcaagcgacgtgatggtgtc
gatgccttgtttgctacctctacgctggcgcagggcatgaacctgcctagcgacgtggtc
ctgatcgctggcgacagtcgttgggacgtgtccgacgacaagtttaaacagctcgacgca
cacgaactgctcaatgccgctggccgagccggtcgtgccggcgaaggcggccagggtttc
gttttggttgtgccgagcaagatcatcaacatcgatgacgatgacaacacgatcaatcgt
cactggatgtcacttcagagcattttttcccagtcggaccagtgcttgaagatcgatgac
cctatcactgggttactcgatcgcattcacatgcaaacccacgacggcaatgaggattat
tttctcgcgcgcctgccggttggtgaggatggtacgccggacgaacctgccaaggcgatg
attcgacgatctttcgctgcgtaccgtaagcggcaggagggcaaggccgagtggattgaa
agccgtatcgacgcagcgcttgcacgtcgcgaagaactggccccaaaaaaggatttgacc
tggcttgagcgggtcgccgcgtcagcgggccttccctacgaggtggtcaccagcctggca
gagttgattgaggccggtgcattcgacggtgacagcactgactgcatgaacacgctgttc
gactgggtcgaggcgcatccggcttggctgatgcacctgatccggccaaacgatatcgaa
gggttgttcggcaaggactaccgggcgattgccgggaacgccgctaaagctaaagtcgcg
ctcccgcagatcaggccgctcctgaccgcatggatggcaggcaagccgctttgcgaactc
gaacgagcgatcggtaccaaggagcacctcatcaaaacctgcgagaccgcgcggcatttt
gcggttcgtctagttccggatctggctttcgtcgccggcttgcccgcgcgcatccttgcg
gccaaagcggtggctgccggagaggagcctgccataccgattgtcttgcagactttgagc
ggggtggtccggaagggatgcgcgagcccagaacagcttgcgaacgcggtgcatcttaag
tcggaatcacggcccagtgctcgtgcgaggttcgccgaaatccaacattacatttcggcc
agcgacctcttcgcatcttttgaaagcgttcttgatcgggtccggcaggcccatgcgatc
gctatgtttgatgacctctag
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