Rhizorhabdus dicambivorans: CMV14_20005
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Entry
CMV14_20005 CDS
T05084
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
rdi
Rhizorhabdus dicambivorans
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rdi02000
]
CMV14_20005
Transporters [BR:
rdi02000
]
Other transporters
Pores ion channels [TC:
1
]
CMV14_20005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ATE66406
LinkDB
All DBs
Position
4255775..4258063
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AA seq
762 aa
AA seq
DB search
MRNKRTHLYSRAICLATIAALAPVMPAIAAEETGAATTGGLEEIVVTAQRRSENLQEVPI
SVTAVSESMLTSAGIQGTAGLQQLTPGLVTYQVAAAFLPYIRGIGSSLSQNGFDSSIAIY
IDGIYQANKASNIFDLNSIERIEVLKGPQGTLFGRNATGGAINVITKDPGQRAEFRIEAG
YGRFDERRLRAYASAPITETLGANVGIALRKDDGYVKDRALGRNIAITDRFALSAKMRWS
PSDRFDARLSFLYNDDSDNSSLSVHVLPGTLSTAASRGIPTTSNNYESRLSGVPTITNKS
HGITLNMRYDAGFADLVSISGYRKGRALSFSDGDLSPANLAYSAAPQSGRQASQELQLVS
NKGGPLQWITGLYYIWDNQGYANNANQRGLNSASNVPPPPVTPADLLVPGASVVGFTTRA
TTRSKAAFAQASYHLTDADQITVGLRYSHESKALKGIQYRRTGVAGVGGAPASFLDTQLA
AVDTSKSFSRVTWRAAYDHQFNDDLMGYISYNRGFKSGGFNPTVVNANPPAVDPETLDAY
EIGLKSEFFDRRLRFNIAAFYYDYRDIQVQLISAANSLTTTENAGAAETYGLDIDLEAVP
SDVLKIRAGLNLLHSKYTKYPAASVFVPRVVAGTSTPTGGNVQVGLNAKGFDTVFAPKIT
ANIGFDYDIPVGNSRITLSGSAYYNDGYDVSPGGINAHVEAFETVNGSITYYGPDDRYFV
RLWGENLTKDVHPIYLSPQSLAYQVANNRPISYGVTVGFSLN
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgagaaataagcgcacccacctctattcgcgtgccatatgcctggcgacgatagccgcg
ctcgcgccggtcatgccggccatcgcggccgaagaaaccggcgctgcgaccacgggcggg
ctggaggagatcgtcgtcaccgcccagcggcgcagcgagaaccttcaggaagttccgatc
tcggtgacggcggtttccgaatccatgctcacatcggccggcatccagggcacggccggc
ctgcaacagttgaccccgggcctggtcacctatcaggttgccgcggccttcctgccttat
attcgcggcatcggctcgtcgctgtcgcaaaatggcttcgacagttcgatcgcgatctac
atcgacggcatctaccaggcgaacaaggcgtccaacatcttcgacctcaacagcatcgag
cggatcgaggtgctgaaggggccgcagggcacgctgttcggccgcaacgccaccggcggt
gcgatcaacgtcatcaccaaggatcccggccagcgcgcggaattcaggatcgaggcgggc
tacggccgtttcgacgagaggcggctgcgggcctatgccagcgcgccgatcaccgagacg
ctgggcgcgaatgtcggcatcgcgctccgcaaggacgacggctatgtcaaggatcgcgcc
ctcggccgcaacatcgccataaccgatcgtttcgcactgtcggccaagatgcgctggtca
ccgagcgacaggttcgatgcgcggctgtccttcctgtacaacgatgactcggacaactcg
tcgctttcggtccacgtgctgccgggcacgctgtccaccgccgcgtcgcgcggcatcccc
accacctcgaacaattatgaatcccgcctcagcggcgtgccgacaatcaccaacaaatca
cacggcatcaccctcaacatgcgatatgatgcgggcttcgccgatctggtctcgatcagc
ggctatcgcaagggccgggccctttccttctccgacggcgatctgtccccggccaatctc
gcctattcggccgcgccgcagagcggccggcaggcttcccaggaattgcagctcgtctcg
aacaagggcggcccgctgcagtggatcaccgggctctactatatctgggacaatcagggc
tatgcgaacaacgccaaccagcgcggcctgaacagcgccagcaacgtgccgccgccgccg
gtgacgccggctgatctgctcgtgccgggcgcgtcggtggtcggtttcacgacgcgggcc
accacacgcagcaaggccgccttcgcccaggcatcctatcacctgaccgacgccgaccag
atcaccgtcggcctgcgctacagccatgagagcaaggcgctgaagggcatccagtaccgg
cggaccggcgtggcgggcgtgggtggtgccccggcatccttcctcgacacgcagctcgcg
gcggtcgatacgtccaagagcttctcgcgcgtgacgtggcgcgccgcctatgatcatcag
ttcaacgatgatctgatgggctacatcagctacaatcggggcttcaagagcggcggcttc
aaccccaccgtggtcaatgccaaccctccggccgtcgatcccgaaacgctggacgcctat
gagatcggcctcaagagcgagttcttcgaccgcaggctccgcttcaacatcgcggcattc
tattatgattatcgggatatccaggtgcagctcatttccgctgccaacagcctgacgacc
accgaaaatgccggtgctgccgagacctacggcctcgatatcgacctcgaagcggtgccg
agcgacgtgctcaagatccgcgccggcctcaacctgctgcactcgaaatacaccaaatat
ccggccgcctcggtcttcgtaccgcgcgtcgtcgcgggaaccagcacgcccaccggcggc
aatgtgcaggtcggcctcaacgcgaagggcttcgacaccgtcttcgcgccgaagatcacc
gccaatatcggcttcgattatgacatcccggtcggcaactcgcggatcaccctgtccggg
tcggcctattacaacgatggctatgatgtgtcgcccggcgggataaacgcccatgtcgag
gcgtttgagacggtcaacggctcgatcacctattacggccccgatgaccgctatttcgtg
cggctatggggtgagaacctcaccaaggacgtccatcccatctatctgtcgccccagtcg
cttgcctatcaggtcgcgaacaaccggcccatcagctacggggtaaccgttggattttcc
ttgaactga
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