Rhizorhabdus dicambivorans: CMV14_22870
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Entry
CMV14_22870 CDS
T05084
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rdi
Rhizorhabdus dicambivorans
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rdi03032
]
CMV14_22870
03400 DNA repair and recombination proteins [BR:
rdi03400
]
CMV14_22870
Enzymes [BR:
rdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CMV14_22870
DNA replication proteins [BR:
rdi03032
]
Prokaryotic type
DNA Topoisomerases
CMV14_22870
DNA repair and recombination proteins [BR:
rdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CMV14_22870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ATE66903
UniProt:
A0A2A4FX06
LinkDB
All DBs
Position
complement(4842699..4845245)
Genome browser
AA seq
848 aa
AA seq
DB search
MKLVVVESPAKAKTIEKYLGPGHRVLASYGHVRDLPAKDGSVDPDNGFAMEWEAYADKTK
QLKAIADEAKSADTLILATDPDREGEAISWHVQEVLAKRKALPKDVQRVTFNAITKPAIL
EAMANPRELDRDLIDAYRARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVALRLVVDRE
REIELFKPQEYWSVTADMEHDGIPFVARLARWKGQKIDRLTIGNGGDAAQAKADVEAGRF
AVASIETRPLTRNPSPPFTTSTLQQEAARKLGFSASHTMRIAQGLYEDGAITYMRTDGVQ
MDGSAISAARGAIANRYDASYVPDKPRQYQAKAKNAQEAHEAIRPTDFSKDRAGSGDHGR
LYDLIFKRALASQMASARLERTTVDLVDGTGQHGLRATGQVVLFPGYLALYEEGRDDEGD
EESRRLPRIKEGDAPAKKKVDSEQHFTQPPPRYSEASLVKKMEELGIGRPSTYASILQTL
KDRDYVTVEKNRFTPNESGRLVTSFLERFFERYVSYDYTAGLEESLDDVSGGRAGWQAVL
EAFWKDFKPKTAEVMEQKPSDITKALDEFLAPYLFPDKGDGTDPRLCPVCTQGQLSLRGG
RFGAFIACSNYPECKYTRRFAQAGGASDAGADAGPVVIGTDPDTGMEVSKRAGRFGPYIQ
LGDGKDAKRSSIPKDVPGEDLDLGWALKLLSLPRTIGAHPETGNPITASIGRFGPYLAHD
GKYARLGSTAEVFETGMNAAVAKLADAANGGGRQRGKTEPLKTFGDSPVTGKEVKLMAGR
FGPYVTDGETNATLPKSASPDELTAEQALELLAARAAKGPPAKGKKKAAPKKAPAAKKAP
AKKAAAKE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcgtcgtcgaatcgcccgccaaggccaagaccatcgaaaaatatctgggg
ccgggccaccgcgtgctcgcttcctacggccatgtccgcgatctgccggccaaggacgga
tcggtggatcccgacaacggcttcgcgatggaatgggaggcctatgccgacaagaccaag
cagctcaaggcgatcgccgatgaggcgaagtccgccgacacgctgatcctggcgaccgac
cccgatcgcgagggcgaggcgatcagctggcatgtccaggaggtgctggccaagcgcaag
gcgctgcccaaggatgtccagcgcgtcaccttcaacgcgatcaccaagcctgcgatcctc
gaggcgatggcgaacccgcgtgagctggatcgcgatctgatcgacgcctatcgggcccga
cgcgcgctcgattatctggtcggcttcaccctgtcgccggtgctgtggcgcaagctgccg
ggcgccaagtccgcaggccgtgtccagtcggtggcgctgcgcctggtggtcgatcgcgag
cgcgagatcgagctgttcaagccccaggaatattggtcggtcaccgccgacatggagcat
gacggcatccccttcgtcgcgcgcctggcgcgctggaaggggcagaagatcgatcggctg
acgatcggcaatggcggcgatgcggcccaggccaaggccgacgtcgaggccggccgcttc
gcggtcgcgagcatcgagacccgcccgctcacccgcaacccctccccgcccttcaccacc
tcgaccctgcagcaggaggccgcccgcaagctcggtttctcggcgagccacacgatgcgc
atcgcgcaggggctctatgaggacggcgcgatcacctatatgcggaccgacggcgtccag
atggacggcagcgccatctcggcggcgcgcggcgcgatcgccaatcgctacgacgcttcc
tacgtgccggacaagccgcgccagtatcaggcgaaggccaagaatgcccaggaagcgcat
gaggcgatccgccccaccgatttttcgaaggatcgcgccggcagcggcgaccatggccgg
ctctacgatctgatcttcaagcgcgcgctggccagccagatggcttcggcgcggctggaa
cggaccacggtcgatctggtcgacggcaccggccagcacggcctgcgcgcgaccggccag
gtcgtcctcttccccggctatctcgcgctctacgaggaaggccgcgatgacgaaggtgat
gaggaatcgcgccgcctgccgcgcatcaaggagggcgatgctccggccaagaagaaggtc
gattcggagcagcatttcacccagccgccgccgcgttattcggaggcgagcctggtgaag
aagatggaggaactggggatcggccggccgtcgacctatgcctcgatcctccagacgctc
aaggaccgcgactatgtgacggtcgagaagaaccgcttcaccccgaacgagagcgggcgg
ctggtcaccagcttcctcgagcgcttcttcgagcgctatgtgagctacgactacaccgcc
gggctggaggagagcctggacgacgtctcgggcggccgcgccggctggcaggcggtgctg
gaggccttctggaaggacttcaagcccaagaccgccgaggtgatggagcagaagccctcg
gacatcaccaaggcgctcgacgaattccttgcgccctatcttttccccgacaagggcgac
ggcaccgatccgcgcctctgcccggtctgcacccagggccagttgtcgctacgcggcggg
cgcttcggcgccttcatcgcctgctccaactatcccgagtgcaaatatacccgccgcttc
gcccaggcgggcggcgcgagcgatgccggcgccgatgcggggccggtggtgatcggcacc
gatcccgatacggggatggaggtcagcaagcgcgcggggcggttcggcccctatatccag
ctcggcgacggcaaggatgccaagcgatcgtcgatcccgaaggacgtgccgggcgaggac
ctcgatctcggctgggcgctgaagctgctgtcgctgccgcgcaccatcggtgctcacccg
gaaaccggcaacccgatcaccgcctcgatcggccgcttcggcccttatctggcgcatgac
ggcaaatatgcgcggctcggctcgaccgccgaggttttcgagacgggcatgaacgcggcg
gtggcgaaactcgccgacgcggcgaatggcggcggccgccagcgcggcaagaccgaaccg
ctcaagaccttcggcgacagcccggtgaccggcaaggaggtcaagctgatggcgggccgt
ttcgggccctatgtcaccgacggcgagaccaacgcgaccctgccgaagtcggccagcccc
gatgagctgaccgccgagcaggcgctggaactgctcgcggcgcgggccgcgaaggggccg
ccggccaagggcaagaagaaggccgcgccgaagaaggcgccggctgccaagaaggcccct
gcgaagaaagctgcggccaaagaataa
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