Rhizorhabdus dicambivorans: CMV14_23065
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Entry
CMV14_23065 CDS
T05084
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rdi
Rhizorhabdus dicambivorans
Pathway
rdi00061
Fatty acid biosynthesis
rdi00071
Fatty acid degradation
rdi01100
Metabolic pathways
rdi01212
Fatty acid metabolism
rdi02024
Quorum sensing
rdi04146
Peroxisome
Module
rdi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CMV14_23065
00071 Fatty acid degradation
CMV14_23065
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CMV14_23065
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMV14_23065
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rdi01004
]
CMV14_23065
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rdi04147
]
CMV14_23065
Enzymes [BR:
rdi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CMV14_23065
Lipid biosynthesis proteins [BR:
rdi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CMV14_23065
Exosome [BR:
rdi04147
]
Exosomal proteins
Exosomal proteins of breast milk
CMV14_23065
Exosomal proteins of breast cancer cells
CMV14_23065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4314
Motif
Other DBs
NCBI-ProteinID:
ATE66934
UniProt:
A0A2A4FWX7
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All DBs
Position
4888277..4890001
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AA seq
574 aa
AA seq
DB search
MTSGDTVAPPKSPRRGAASPDGGDVPASPPIPPRLLTDLIDAAVRDHGGRTAIDFLGRTW
RYAEIGAMVDRAAAGLQAMGVGPGVRFGLCLPNTPYFVVLYFAALRCGATIVNFNPLYVE
HELKHQIRDSGTTVMAVIDVASIHAKIAAIAQESGLEKIIVCPMTEILPPLLSILYRLFK
RGEIARPPRDGRHVTFADILAGGDGFRPVPIDPDDVAVLQYTGGTTGVPKGAMLTHANLT
ANSRQMILHVAGTKAGDPARQDRIMGVLPMFHVFALTTVLNFSIDTAALMILLPRFELKQ
FLKTAKRTRPTKLLAVPTMLTAINKAAAERPIHFDDLDFCVSGGAPLPFDVRAEFERLTG
ARVVEGYGLSETSPILTCNPCEGEVKDNSAGPAFPGTIIEIRSLEDPHQLMPVGQRGEVC
ARGPQVMKGYWNKPEETAKVFVDGAIRTGDVGYLDEDGYLFLVDRIKDVIICGGYNVYPR
VIEEALYEHPAVLEAVVIGVADAYRGQAPKAFVVLRPGQQASIDDLSEFLKTRVSKIEMP
REIEIRTSLPKTLIGKLSKKELVAEEARKASPAS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgacctccggcgacaccgtggcacccccgaaatccccccgtcgcggtgccgcatccccg
gacggcggggacgtgccagcgtccccgccgattccgccccggctgctgaccgacctgatc
gatgccgcggtgcgcgaccatggggggcgcaccgcgatcgacttcctcgggcggacatgg
cgctatgccgagatcggcgccatggtcgatcgcgccgccgccggcctgcaggcgatgggg
gtgggacccggcgtgcgtttcggcctgtgcctgcccaacaccccttatttcgtggtgctc
tatttcgcagcgctgcgctgcggggcgacgatcgtcaatttcaatccgctctatgtcgag
catgagctgaaacaccagatccgcgattcgggcaccaccgtcatggcggtgatcgatgtc
gcctccatccacgccaagatcgccgcgatcgcccaggaaagcgggctggagaagatcatc
gtctgtccgatgacggagatattgcccccgcttctctcgatcctctaccgcctgttcaag
cgcggcgagatcgcccgcccgccccgggacgggcgccatgtcaccttcgccgacatcctc
gccggcggcgacggcttccggcccgtgccgatcgacccggacgatgtcgcggtgctccaa
tataccggcggcaccaccggcgtccccaagggcgcgatgctgacccatgccaatctgacc
gccaacagccgccagatgatcctgcacgtcgcgggaaccaaggccggggatcccgcgcgg
caggatcggatcatgggcgtattgccgatgttccacgtcttcgccctgacgacggtgctc
aacttctcgatcgacaccgccgcgctgatgatcctgttgccgcgcttcgaactgaagcag
ttcctgaagaccgcgaagcgcacccggccgaccaagctgctcgccgtgccgaccatgctg
accgcgatcaacaaggcggcggccgagcggccgatccacttcgacgatctcgacttctgc
gtttcgggcggcgcgcccctgcccttcgacgtgcgcgccgagttcgagcggctgaccggc
gcccgcgtggtggagggatatggcctgtcggaaacctccccgatcctgacctgcaatccc
tgcgagggcgaggttaaggacaacagcgccggcccggccttccccggcaccatcatcgag
atccgcagcctcgaagacccgcaccagctgatgccggtgggccaacgcggcgaagtctgc
gcacgcgggccacaggtgatgaagggctattggaacaagcccgaggagaccgccaaggtg
ttcgtcgatggcgcgatccgcaccggcgatgtcggctatctcgacgaggacggctatctt
ttcctggtcgaccggatcaaggacgtcatcatctgcggcggctataacgtctatccgcgc
gtgatcgaggaagcgctctatgaacatccggccgtgctggaagcggtggtgatcggcgtc
gccgacgcctatcgcggccaggcgcccaaggccttcgtggtgctgcgccccggccagcag
gcgagcattgacgacctgagcgaattcctcaagacacgcgtctccaagatcgaaatgcca
cgcgagatcgaaatccgtaccagcctgcccaagacgctgatcggcaagctttcgaagaag
gaactggttgccgaggaggcccgcaaggcctcccccgcaagctga
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