Rothia dentocariosa: HMPREF0733_10070
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Entry
HMPREF0733_10070 CDS
T01343
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HMPREF0733_10070 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rdn03016
]
HMPREF0733_10070 (trmU)
Enzymes [BR:
rdn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
HMPREF0733_10070 (trmU)
Transfer RNA biogenesis [BR:
rdn03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HMPREF0733_10070 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
ThiI
NAD_synthase
QueC
Asn_synthase
Motif
Other DBs
NCBI-ProteinID:
ADP39528
UniProt:
E3H4I2
LinkDB
All DBs
Position
complement(78052..79263)
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AA seq
403 aa
AA seq
DB search
MKILAAMSGGVDSAVAAARAVEAGHEVVGVHLALSRMPGTLRTGSRGCCTLEDSMDARRV
CAQLGIPFFVWDFSERFKEDVVDDFIAEYEAGRTPNPCMRCNEKIKFAALLERAVSLGFD
AVVTGHYARVITNDDGNRELHRAADWAKDQSYVLGVLTHEQLKHAWFPLATTPSKAEVRA
EAERRGFSVAKKPDSYDICFIPEGDTRAWLGEHIQMRPGMIKDTSGNVVGEHPGAQGFTV
GQRKGLALGTPAPDGKPRFVLEIRPKTNEVIVGSRELLSIDEIRGIRATWAGIPVPEAEH
FLAQEPKLGVRSETFDVTAQVRAHADPVRGTAHLEWAEDTDAETPGKLRVETVVRLHDGL
FGVAPGQTMVLYQGTRVLGQSTIARAYSLAREDLDDLRENAAV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgaagattttggctgctatgagtggcggcgtcgattcagctgttgctgccgcccgtgcc
gttgaggcggggcatgaggtagtgggcgtgcatttggcgctttctcgtatgcccggaacg
ctccgcaccggttctcgtgggtgctgcacccttgaagattctatggatgcgcgccgcgta
tgcgcccagttgggcatacccttcttcgtatgggacttctcggagcgtttcaaggaagat
gtagttgatgattttatcgccgaatacgaagcgggacgaacccccaacccctgcatgcgc
tgtaacgagaaaatcaaatttgccgcgcttttggaacgtgccgtctccctagggtttgat
gcggtagttaccggtcattacgcccgcgttatcaccaacgacgacggtaaccgagaactg
catcgagccgcagactgggcaaaagatcagtcctatgtgctgggcgtccttacccacgaa
cagctcaaacacgcctggttccccctagcaaccacgccctcgaaggcagaggttcgtgcg
gaggctgaacggcgtggtttttcggttgccaagaaaccggactcttacgatatttgcttt
attcccgagggtgatacccgtgcctggctaggcgagcacattcaaatgcgccctggcatg
attaaagacacctccggcaatgtggtgggggaacaccctggggctcaaggatttactgtt
gggcagcgtaaggggctagccttaggcactccggcgcctgatgggaaaccccgctttgtt
ctcgaaatccgaccaaaaacgaatgaagttattgtcggttctcgtgagttactttctatc
gacgaaatccgcggaattcgggccacctgggctggaattcctgttccggaagcagaacat
tttcttgctcaggaaccaaaactcggcgtgcgcagcgagacctttgatgttaccgctcaa
gtgcgtgcacatgcagacccggtacgcggtaccgcgcatcttgaatgggcagaagatacc
gatgccgaaacccccggaaaacttcgtgtagagactgtggtgcgtctgcacgatgggctc
tttggcgtggcacccgggcaaactatggtgctttaccagggcacacgagttttaggacag
tccaccatagcccgtgcttactcacttgctcgtgaagaccttgatgatcttcgtgaaaac
gcagcagtgtaa
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