Rothia dentocariosa: HMPREF0733_10203
Help
Entry
HMPREF0733_10203 CDS
T01343
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HMPREF0733_10203 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdn03400
]
HMPREF0733_10203 (xseB)
Enzymes [BR:
rdn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HMPREF0733_10203 (xseB)
DNA repair and recombination proteins [BR:
rdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HMPREF0733_10203 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Spectrin_SYNE1
CHASE3
DUF7260
TraB_PrgY_gumN
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ADP39661
UniProt:
E3H5B5
LinkDB
All DBs
Position
219894..220175
Genome browser
AA seq
93 aa
AA seq
DB search
MSENISFHTEELGAPVETLSYEQARSELENVVRQLESGTSNLESSIALWERGEALASRCE
AWLEGARERLHAVRNTQDATGEEAESEGSESED
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgagaatattagttttcatacggaagagctgggtgctcccgtcgagaccctaagc
tatgagcaggcgcgctccgagcttgagaatgtggtgcggcagctagaatctggcacctca
aatttggagtcttcgatagccctgtgggaacgcggtgaggcgttagcttcccggtgtgaa
gcctggcttgaaggcgcccgggaacgcctgcacgcggtgcgtaacactcaggatgcaacg
ggtgaagaagctgagtctgagggctccgagtccgaagactaa
DBGET
integrated database retrieval system
