Rothia dentocariosa: HMPREF0733_10358
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Entry
HMPREF0733_10358 CDS
T01343
Name
(GenBank) ribonuclease
Organism
rdn
Rothia dentocariosa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Ribonuclease
DUF4595
MukF_M
Motif
Other DBs
NCBI-ProteinID:
ADP39816
UniProt:
E3GZT1
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All DBs
Position
382566..389558
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AA seq
2330 aa
AA seq
DB search
MGEYDNMHVLERDVEFDFNHADILLSIFRYLKRKLEIQLPERQRYIGIAQREFKGHFARV
FDQNCKYSISECKNLITALGDAATDLQKYIDAAHQENENRKKFREAMANWEEEKRKIRDN
IENDNRNTFISFQKDPAAHYPPQPQPNLDNEGPKFDERAPIIKSRNTGRNAEVIGRNRTH
RAEKRARDAAQDATETTSAIPGNLVTFAQKNSKSDQRIAELYSNITKSYSSFAEHTSWGV
FDAVSLFNSIAKWVDANQSDVRWILTVAEAFATAGSQGMLGPIYSEADFLDYPQYLNTGY
IRNYLKEQKISTDRPSIDVSRATITGAVYSAGYALDPVNVATGNFIEHECDLSFEHAPAA
SLIKLERMYNSVAVTYPEEAPSGIFGLGWSSTLDTQLTLSNTGAVWHTPDGRTLAFPRMG
DGFGRVPSESYWLSKTVPGDELYSYVSTATTKAIKTAENAGRKVSAPTAPAYYWVVYNSK
HVRYFYDPSGAWTGVMEGHYATLTLPLYSSDSATGALELTDIVHPASGRGLQIRYGNSPR
YNRIRPESASTYLIDHDVQILDTVTYIYDDDDLLAAVNRPDGIRRYTHNAKRLIEEVWDV
NGHREVTNTYDGQGRVVHQLTEHSREVSFVYAPGIMTIVADAITGDSSNIWRSDEHGRLS
SMTAADGSRQVMRYDKFGNRISVTERDGSTISRSYDSHSRLAKQLTPEGALSKYTWDEHN
RLLTTSVCDFRDRLNPGDPVVVSYTYESTGANPNPITMTDGNGHTTEYSWDEYGNLLSVT
DPTGVRTTYTYNARQELISITNGVGDTVHLEYDKHGRIVQVRDALGHVTSTHWNSAGQLA
SVTDAAGSRWSLTYPELAPEELDVPAFVRQNLTSSSTHCIHNTSRPMGQLPVSLTDPYGH
VTHFEYNNGNQITAVTDPLGRTNRAVFDAWGNMVKTINALGAVTNYEYDGLSQLIAVTDP
LGARSEFDYDLAGEISQITDATGVVTHRTVDRRTGKETTSSGGILGSSFRHVDYLGRVII
EGENNPQNFTSSQPVRRASQNSKSPSASPRNSETVTEFTAYDAAGNPVETLDAHGGLTRR
TYDAANRLIREVSAAGRTQTFDYDQAGRLRRIGVGLSVPEQKPTVGENVEWEEPTAWAYT
TLTYDAASRIIARTYPDGTTEHTTYDALGRIVRVQHGARTATYAYDRCSRLIRMSDNSAG
TRRFIYDAAGQLVTAVDALGYRTHFEYDAAGQMVRTLDATGQVTTYIYDAAGQLIRTIKG
AGSTAEITSTYTYDAAGRLLSENNGERTRAYSYDYQGGGLLASLSVNGVCAAEYSYSSGT
SSIGHRTVTVRDYASASALRDRDSSAFAGIEKPYLEHRFVYDSSDRLISRSRSGFLRSDD
QSNAHADDDIHERLHALNTFIKTGAYTLTYSYDADGYLITSVTPYAKSTRTVDGAGRTVA
VTTHATGQPAHDVISSVFSYDPLGRLTRIRVGDMVSSWTHERTTGLISDYVREQVLADVR
GFEESKVLERTQVIRDHNGRVIGLDSTGSDTSPDGLVLYSYDYAGQLVGARSASHVWEWE
YTAGVMMRERVFALDSSNGSERSAAGSRVLEGERIFTHNEANQLVAVEARAYAGARGGAG
ELAAHTITDYSYNLAGERSGEVTTDKLTGASYSREYSWGAYGGLTSVTDSVSSRVGISRT
SLISDAVGEVSAVSDGEGITVPLMWDARSDIPHLLGAGATSAPSSDGGFSQAGIPGGMMP
WHTLNVPGLTGSTLDSALGSTPGLPTDWGVPSASATPVPGMPTGFEFTGAGSLRVAGLDM
LGARVYDSPSRRFLSTDPKAAIAGSSWFADVYAYAGNNPLEYVDPRGERPMTVADYRKYQ
SQEGERFVQQSLRFLALVGVIGSLFIAPTSILLAGGVGFISGAANGAADGMDFHTPDGNI
DWDKVQAYALQEGGKEALTAALIGMLFKAGPPVARATGNQAMKVPVISRTVDRVKTSPVV
IKTQNTVNAVKTRINGIQDRIATWTRTSLLGIEHVVPKVHPTPHNSPHQIDIPNGPKPTH
TGSLAHRTSGTVHEPNVQLKPVEEPKVENLPPAKGVASDSPSLEKPATDGKHASWVEHPP
GSKLQNGDQTATYLAGDDFKKTLVKNTKDSSRYVPAEEPGTYSVYGFDEAKKLEREYYIK
LNGGNSPADLSKGKPEFALWRPEVGEPNLDTAMTSFRDVTRHGNTVEAQVGSHKFMVTNL
DEYTGTIPDDVVPTAKSLYETGEVHWTGRDYKPEGFGNVPDPLPFDNKEARILPTHDYAG
NEIDYTKYRVRRLARTANQVNDPGAERLIVGSNGSMYYTPDHYKTFVRIF
NT seq
6993 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaatacgacaacatgcacgttctagagcgtgatgttgagttcgattttaatcat
gccgatattctgctcagtatattcagatatttaaaaaggaagttagaaatacagcttccg
gaacggcagcggtatattggcatagcccaacgtgagtttaaaggacatttcgcacgagtt
tttgatcagaactgtaaatattccatctctgaatgtaaaaacctgattacagccctgggc
gatgccgctaccgacctgcagaagtatattgatgctgcacaccaagaaaatgagaatcgt
aaaaaattccgtgaggctatggcaaactgggaggaagaaaaacggaagatcagagataac
attgaaaatgataatcgaaatacatttataagttttcagaaagatcccgctgctcattac
cctccccaaccacagcctaatctagataacgaaggtcccaagttcgacgaacgcgccccg
attatcaaatcccgtaatacgggcagaaatgcagaggttattgggcgcaaccgtacgcat
cgcgccgaaaagagagctcgggacgccgcccaggatgctaccgagactacctcggctatt
cccggcaacctcgtgacatttgcgcaaaagaactctaagtcagatcaaagaattgctgag
ctttactccaatatcacgaaaagctacagctctttcgctgagcatacatcatggggtgtt
tttgatgccgtaagcctttttaactcgatcgcaaaatgggttgatgccaaccaatctgat
gttcgttggattctcactgttgcggaagctttcgcgacggctggttctcaaggaatgtta
ggccctatttattctgaagcagattttttggattatccgcagtaccttaatacggggtat
atccggaattatctgaaggaacagaaaatttctacagatcgtccgagtattgacgtttct
cgtgcgacaataaccggcgcggtatactcagcgggatatgcgcttgatcccgtaaatgtt
gccacagggaatttcattgagcatgagtgtgatctctccttcgagcatgctcctgcggca
tcgctcatcaagcttgaacgtatgtacaacagcgttgccgttacctatcccgaagaagcc
ccttcgggcatctttggtctcggttggtcttctacgcttgatactcaacttacgttgagt
aacacgggcgctgtatggcacacgcctgatggtcggactcttgcattccctcgtatgggc
gacggttttggtcgtgttccttccgaatcatattggcttagcaaaactgttcccggcgac
gagctttacagctatgtttccacagcgacgacaaaagcaatcaagacggcagagaacgct
gggcgcaaggtcagcgcacctactgcacccgcatattattgggttgtttacaactccaag
cacgttcgatacttctacgatccttctggtgcctggacaggcgtgatggaggggcattat
gcaaccttaacactgcctctttactcatcggattccgcaacgggtgcgttagagctgact
gacattgttcacccggcctcaggtcgaggtcttcagatacgctacggcaactcaccccgt
tataaccgtattcgccctgaatctgccagcacctaccttatagatcatgatgtgcagata
cttgataccgtcacctacatttatgacgatgatgatctgctagcagcggttaaccgtccc
gacggtattcgtcgttacacccataacgctaagcgccttattgaagaagtgtgggacgtg
aacggccaccgtgaagtcactaatacctatgacggccaaggacgtgtggtccaccagctg
actgaacattcccgtgaagtgtctttcgtctatgctccgggcattatgacgattgttgct
gacgcgataaccggcgacagctctaatatttggcgctcggatgaacacggacgtcttagc
tctatgacggctgctgatggcagccgccaagtcatgcgctacgataagttcggcaaccgc
atcagcgttactgaacgcgatggttctacgataagccgttcctacgactctcacagtcgt
ttagcgaaacaacttacccccgagggcgcactgtctaagtacacctgggacgaacataac
cgcctgctcacgacctctgtatgtgatttccgtgatcggctcaaccccggtgatcccgtg
gtagtgtcatatacctacgaatcaacaggtgcaaacccaaaccccatcactatgaccgat
gggaatgggcatactacagaatatagctgggatgagtacggcaaccttctaagcgttact
gaccccaccggtgtacgtaccacatacacctataacgcacgtcaagaactgatcagcata
acaaacggcgttggcgatacagtccatctagagtacgacaaacacggtcgcatagtgcag
gttagggatgctctaggtcacgtaacctctactcattggaactccgccgggcaactcgcc
tcggttacggatgctgccggttcacgctggtctctcacgtaccctgagcttgctcccgaa
gagctagatgttcctgcttttgtacgccaaaaccttacttcaagcagcactcattgtata
cacaatacttcgcgccctatgggtcagctgcccgtttctttgacagatccttacggtcat
gtcacacactttgagtacaataacggcaaccaaatcaccgctgtcacggatccactgggt
cgtaccaaccgcgcagtatttgatgcctggggcaacatggtcaagactattaatgccctc
ggtgccgtaaccaactatgaatacgatggcctgtcacaacttattgcggtaacagatcct
ctgggtgcccggagtgagtttgactacgacttggctggcgaaattagccagattacggat
gctaccggtgttgttacgcaccgcactgtagaccgtagaacgggcaaagaaactacgtcc
tccggcggaatactcggatcttcattccgtcacgtcgattatctgggacgggtgattatt
gagggcgagaacaatccccaaaatttcacctcttcgcagccggttagacgtgcatctcaa
aactcaaagtcaccgagtgcatccccaagaaacagcgaaactgttaccgagtttacagcc
tatgacgccgcaggcaatcccgttgaaactcttgatgctcatggcggactcacccgccgc
acctacgatgcggcaaaccggctgatacgcgaggtatctgcggcgggacgcacccaaaca
ttcgactatgatcaagctgggcgtctgcggcgtataggtgtggggctaagcgtacccgag
cagaagccgacggtgggcgagaacgtggagtgggaagagcctaccgcttgggcgtacaca
acgctaacctacgacgccgcatctcgaattattgcccggacctatcctgacggcacaact
gagcatacgacgtatgatgcccttggccggattgtacgggtgcagcatggggctcgcacg
gcaacgtatgcatacgaccggtgctcacgcctgatccgcatgagtgataacagcgctggt
acccgcagattcatctatgatgcagccggtcagctagtgactgctgtagatgccttaggg
tatcgcacccatttcgagtatgacgctgctgggcagatggtgcgcaccctggatgcgacc
ggccaggtcaccacgtatatttatgacgccgcaggtcagcttatccgcaccattaagggc
gcgggttctacggcagagataacatctacatacacctacgatgccgcaggtcgtctgctg
tctgaaaataatggtgagcgaacccgtgcatactcctacgactatcagggtggcggtctg
ctcgcgtctttgagcgtcaatggtgtgtgcgcggcggagtattcgtactcctccggaaca
tcatctatcggtcatcggaccgtgacggtgcgtgactacgcctcagcttctgcactcagg
gaccgcgattcttccgcctttgctggcatcgaaaagccgtaccttgagcatcgttttgtc
tatgattcctccgaccgtctgatctctcgcagccgttcaggattcctaagatcggacgat
caaagcaacgctcatgcagacgatgatatacacgagcgtcttcacgctttgaataccttt
atcaaaaccggcgcatatacgctgacgtactcgtatgatgccgatggttatctgatcacg
tcagtaaccccttacgcaaaatctacacgtaccgtagatggcgccggtcgaacggtagct
gtaacaacacacgccacgggacagcccgctcacgacgttatctcttcagtattctcctac
gatcctctgggacgtctcacgcggattcgggtgggagatatggtgtcttcctggacgcac
gagcgcactaccgggctaatctcagactatgtgcgggaacaggtactcgccgatgtccga
gggtttgaagaatcaaaggttcttgaacgcacacaagtgatccgtgaccataacggccgc
gtgattgggctggattcaacgggatctgatacttcaccggatggtcttgttctgtactcc
tatgactatgccgggcagcttgtgggcgcccgttcagcatcccacgtgtgggagtgggag
tacacagccggagtcatgatgcgcgagcgcgtctttgctctcgatagttctaacggatct
gaacgctcggctgcaggctctcgtgttctggagggtgagcgtatcttcacccataacgaa
gcgaaccagttagtcgccgttgaggctcgcgcatacgcaggtgcacgaggcggcgctggg
gagcttgccgctcataccatcacggattactcctacaacctggcaggcgaacgtagtggt
gaagtcacgaccgataagctcaccggtgcctcatactctcgcgaatatagctggggtgcc
tacggcggcctgacatcggtaacagactctgtttcctcacgtgtaggtatttcacgcact
tcactgatttctgatgcggtgggtgaggtatccgctgtttctgatggtgagggcattaca
gtgcctctcatgtgggatgccaggtcggatattccgcatcttctgggtgctggggcaacg
agcgcacccagctctgacggcggcttttcgcaggcgggtatacccggcggaatgatgcct
tggcataccctcaacgtccccggattgaccggcagcaccctcgattcggcattaggtagc
acacccggactgccgacagactggggcgtgccctctgcaagcgctaccccggtgcccggg
atgcccaccggtttcgagttcacgggtgcagggtcgctacgcgtagccggtctagatatg
ctaggcgctcgcgtctatgacagcccttcacgtcgtttcctctcaacagacccgaaggcc
gcaatagctggttcatcctggtttgctgacgtttacgcatatgcaggcaataatccgctg
gagtatgtggaccctcggggtgagcgccccatgacggttgcagattaccgtaagtatcag
agccaagaaggcgaacgtttcgtgcagcagagtctgcgctttctggctcttgtaggcgtt
attggttcgctgttcatagcgccgacaagtatcctcttggctggcggtgttggttttatt
tctggtgccgccaacggtgccgctgatggcatggatttccatacccccgacggcaatatc
gactgggataaagtgcaggcttacgcccttcaggaaggcgggaaagaagcactcacagcc
gcactcatagggatgctcttcaaagccgggccacccgtagcacgcgccaccggcaaccag
gcgatgaaagtccccgttatctccagaacggttgatcgggttaagacgtcccctgttgtc
attaaaacccaaaacaccgttaatgccgtcaagacccgcatcaacggaatccaagaccgc
attgccacatggacgcgcaccagcctgctgggcatcgagcatgtagtgcccaaagtgcac
cccacgccgcacaatagcccacatcagatagacatacccaacggtcccaaacctacccat
accggctctctcgctcacaggacatcaggaacagtacacgaacccaatgtgcagctgaaa
cctgtggaggaaccgaaggttgagaacctgcctccggcgaaaggtgtggcgagtgattct
ccatcattagagaaacctgctacagatggtaaacatgcatcttgggtggagcatcctccg
ggttctaagctgcaaaatggtgatcagacggccacatatctcgctggtgatgacttcaaa
aagactcttgtgaagaatactaaggacagctctcggtatgtacctgctgaagagcctgga
acgtacagcgtgtacgggtttgacgaagctaaaaagttggagcgagagtattacattaaa
ttaaatggtggaaactctcctgctgacctctctaaaggaaaaccagagtttgccttgtgg
cgtcctgaagttggtgagcctaatctagatacggcgatgactagttttagggatgttacc
cgacatggtaatacggttgaggctcaggttggttcccataaatttatggtgactaatcta
gatgagtacaccggaacaattcctgatgatgtagttcctacggctaagtcactttacgag
acgggagaggtgcattggactggtcgagattataaacctgagggttttgggaatgtcccg
gatcctctgccttttgataataaggaagctcgtatccttcccacgcatgattacgctggg
aatgagatagattatacaaaatacagggttaggcggttagcacgtactgcaaaccaagta
aatgacccaggcgcagaacgtttgattgtcggttctaatgggagtatgtattacactcct
gatcactataagacctttgtacgaattttctaa
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