Rothia dentocariosa: HMPREF0733_10529
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Entry
HMPREF0733_10529 CDS
T01343
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rdn
Rothia dentocariosa
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rdn03110
]
HMPREF0733_10529 (clpB)
Chaperones and folding catalysts [BR:
rdn03110
]
Heat shock proteins
HSP100
HMPREF0733_10529 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
ATPase_2
nSTAND3
TniB
AAA_28
IstB_IS21
AAA_18
AAA_7
AAA_14
Roc
bpMoxR
NACHT
AAA_19
Mod_r
T2SSE
Mis12
Motif
Other DBs
NCBI-ProteinID:
ADP39987
UniProt:
E3H0Y4
LinkDB
All DBs
Position
complement(583531..586128)
Genome browser
AA seq
865 aa
AA seq
DB search
MDAKFTTKSQEALSAANMNAQTAGNPSIEPAHILKALMDQREGVAVAVLKAAGLDIDAIS
EAASAEIKKLPKASGASVQNANFSRSALAAIQSAQTHAQKFGDTYISTEMLLLGIASGDS
DTARALENLGATAKVIEETIPQVRGDRTVDTPDPEGTFQALEKYGTDLTALAREGKLDPV
IGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRMVSGDVPESLRGKTLISL
DLGSMVAGAKYRGEFEERLKAVLEEIKKSEGQIVTFIDEMHTVVGAGASEGSMDAGNMLK
PMLARGELRMIGATTLDEFRENIEKDPALERRFQQVYVGEPSVDDTIGILRGLKERYEAH
HKVQISDAALVAAAALSNRYIPSRQLPDKAIDLVDEAASRLRMEIDSAPEEIDQLRRAVD
RLTMEELALKNETDPASKERLAALRKDMADKKEQLDALNARWEAEKAGLNRVGDLKSEID
ELRSRAEVAQREGNLADASRLLYGEIPAKEKELEEAQRAETEAHGEAMVSEEVTADDIAE
VISSWTGIPAGRMLQGESEKLLEMEKRIGERLIGQEAAVVAVADAVRRARAGISDPNRPI
GSFLFLGPTGVGKTELAKALAEFQFDDEHALVRIDMSEYGEKHSVSRLVGAPPGYVGHEE
GGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILILTS
NLGSQYLVDQEMPFEERTEKAMQVVHQAFRPEFLNRLDDIIMFEPLSSEHLGQIVNLQIQ
GMGKRLTDRRLTLDVTPAALEWLGLAGYDPAFGARPLRRLVQREIGDRLAKGILSGAIHD
GDTVEVDVNPDVAMDGLSVTSKRDD
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaaattcacaaccaagagccaagaagcgctctccgccgctaatatgaacgcg
cagacagcgggtaatcccagcatcgaacctgcgcacatcctcaaagcactgatggatcaa
cgagaaggcgttgccgtagcggttctcaaggccgcaggactcgacattgatgccatttcg
gaagccgcatccgcagagattaagaagctgccgaaggcatctggcgcatcggtgcagaac
gcaaacttcagccgcagcgcccttgccgctattcagagtgcgcagacccacgctcagaaa
ttcggcgacacctacatctccaccgaaatgctgctgctgggtatcgcaagcggcgatagc
gataccgctcgcgcacttgaaaacctgggcgcaactgccaaagttatcgaagagaccatt
ccccaagtacgaggagaccgcaccgtggataccccggaccccgaaggcaccttccaggcc
cttgaaaagtacggtaccgacctgaccgcgctcgcccgcgaaggcaagctcgaccccgtg
atcggccgagactccgaaatccgccgcgtggtgcaggtgctctcacggcgcaccaagaac
aaccccgtgctcattggtgaacccggcgtcggtaaaaccgccgtggtcgaagggttggct
cagcgcatggtctctggcgacgtccccgaatccctgcgcggtaaaaccctgatcagcctt
gaccttgggtccatggttgcgggcgctaaataccgcggcgaattcgaggaacgcctcaag
gccgtgctcgaagaaattaagaaatccgaaggtcagatcgtcacctttatcgatgagatg
cataccgtggttggtgcgggtgcatccgaaggttccatggatgcgggcaatatgctcaag
cccatgctggcgcgcggcgagctgcgcatgattggcgctaccacgctcgacgagttccgc
gagaacattgagaaagaccccgctctggaacgtcgtttccagcaggtgtacgtgggtgag
cctagtgttgatgacaccatcggtattctgcgtgggctcaaggaacgctacgaggcgcac
cataaggtgcaaatctcagatgccgctctagtcgccgccgcagctctttcaaataggtac
attccctcacgtcagctgcccgataaggcgatcgacctggtggatgaggccgcatcgcgc
ctgcgcatggagatcgactcggctcccgaggaaatcgaccagctgcgccgcgccgtagac
cgtctgactatggaagaactggccctcaagaacgagaccgacccggcgtcgaaggaacgc
ttggcggcgctgcgcaaagacatggctgataagaaagaacagctggatgcgctcaacgcc
cgctgggaagccgaaaaggccggtctgaaccgcgtgggcgatctcaagagcgaaatcgac
gagctgcgctcgcgtgccgaggtagcacagcgtgagggtaacctggcggatgcatcccgc
ctgctctacggcgaaattcccgccaaggagaaggaactggaagaagctcagcgcgccgaa
actgaggctcatggcgaggctatggtctctgaagaggtcacggctgacgacattgccgag
gttatctcttcctggacgggcattcccgccgggcgcatgcttcagggcgaatccgagaag
ctgctggagatggagaagcgcatcggtgaacgcctgatcggtcaggaagccgccgtggtt
gctgtggcggatgcggttcgccgcgcccgcgccggaatttccgacccgaaccgcccgatt
ggttccttcctgttcctgggaccgaccggtgtgggtaagaccgaacttgcgaaggctctg
gcggagttccagtttgacgacgagcacgccctagtgcgcatcgacatgagtgagtacggc
gagaagcacagcgtttcccgcctggtgggtgcgcctcccggatatgtggggcatgaagaa
ggcggtcagctgaccgaggctgtgcgccgtcgcccctactccgtggtgctgctggacgag
gttgagaaggcccaccccgaggtcttcgatattctgctgcaggtgctcgatgacggtcgt
ctgaccgacggtcagggccgcaccgtggacttccgcaacgtgattctgattctgacctcg
aacctgggttcccagtatctggtcgatcaggagatgccgtttgaggagcgtaccgagaag
gcgatgcaggtggttcaccaggcgttccgtcccgagttcctgaaccgtctggatgacatc
atcatgtttgagccgctctcttccgagcatctggggcagattgtgaacctgcagattcag
ggcatgggcaagcgtctgaccgaccgccgcctgaccctggatgttacccccgccgccctg
gagtggctgggcttggcagggtacgatccggccttcggtgcccgcccgctgcgccgcctg
gtacagcgcgagatcggcgaccgtctggcgaagggcatcctctcgggcgctatccacgat
ggcgacaccgtagaggtggatgtgaacccggatgttgcaatggacggtctgtcagtgacc
tccaagcgtgacgactaa
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