Rothia dentocariosa: HMPREF0733_10572
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Entry
HMPREF0733_10572 CDS
T01343
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0733_10572 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rdn03019
]
HMPREF0733_10572 (groL)
03110 Chaperones and folding catalysts [BR:
rdn03110
]
HMPREF0733_10572 (groL)
03029 Mitochondrial biogenesis [BR:
rdn03029
]
HMPREF0733_10572 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rdn04147
]
HMPREF0733_10572 (groL)
Enzymes [BR:
rdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HMPREF0733_10572 (groL)
Messenger RNA biogenesis [BR:
rdn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HMPREF0733_10572 (groL)
Chaperones and folding catalysts [BR:
rdn03110
]
Heat shock proteins
HSP60 / Chaperonin
HMPREF0733_10572 (groL)
Mitochondrial biogenesis [BR:
rdn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HMPREF0733_10572 (groL)
Exosome [BR:
rdn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HMPREF0733_10572 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HMPREF0733_10572 (groL)
Exosomal proteins of breast cancer cells
HMPREF0733_10572 (groL)
Exosomal proteins of colorectal cancer cells
HMPREF0733_10572 (groL)
Exosomal proteins of bladder cancer cells
HMPREF0733_10572 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
ADP40030
UniProt:
E3H127
LinkDB
All DBs
Position
complement(626035..627657)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKLIAFDEEARRGLERGLNTLADAVKVTLGPRGRNVVLEKSWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDIAGDGTTTATVLAQALVREGLRNVAAGADPLSLKRGIE
KAVEEVTKTLLDSAKEVETEEEIAATASISAGDQEIGKLIAQAMEKVGKEGVITVEESNT
FGLHLELTEGMRFDKGFLSGYFVTDPERQEAVLEDPYILVVNQKISNVKDLVPVLEKVMQ
SGKPLLIIAEDVEGEALALLVLNKMRGSIKSVAVKAPGFGDRRKAMMADIAILTGGQVIT
EEVGLSLDTATLEMLGKARKVVVTKDETTIIEGAGDAAALEGRVAQIRAEIANSDSDYDR
EKLQERLAKLAGGVAVLKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALIQA
GTKVFDKLDLKGDEATGANIVRVAIDAPLKQIATNAGLEPGVVVDKVRSLPEGTGLNAAT
GEYEDLMAAGINDPVKVTRSALQNAASIAGLFLTTEAVVANKPEPASAAAPAADPMGGMM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacttattgcttttgatgaagaagctcgccgcggtctagagcgcggactgaac
actctagccgatgccgttaaggtaactcttggcccccgtggccgcaacgtcgtgcttgag
aagtcgtggggcgcacccacgatcaccaacgacggtgtttccatcgccaaagagatcgag
cttgaagacccctatgaaaagattggcgctgaactcgtcaaagaggtagccaagaagacc
gacgatatcgcaggtgacggtaccaccaccgcaaccgtgctcgcccaggcgctcgtgcgt
gagggtctgcgcaacgtggctgctggtgctgacccgctgagcctcaagcgcggtattgag
aaggctgttgaggaggtcaccaagaccctgctcgactccgcgaaagaggttgagactgag
gaagagatcgcggcaaccgcatccatctctgcgggcgatcaggagatcggtaagctgatc
gctcaggctatggagaaggtcggcaaggaaggcgtgattaccgttgaggagtccaacacc
ttcggcttgcacctggaactcaccgagggtatgcgcttcgataagggcttcctctccggc
tacttcgtgaccgaccccgagcgtcaggaagccgtgctggaagacccctacatcctggtg
gtcaaccagaagatctcgaacgtgaaggatctggttcccgttcttgagaaggtcatgcag
tccggcaagccgctgctgattatcgccgaggatgttgagggcgaggctctggcgctgctc
gtgctgaacaagatgcgcggctccatcaagtccgttgccgtgaaggcacccggtttcggt
gaccgtcgcaaggctatgatggctgatattgcgatcctcaccggcggccaggttattacc
gaagaggttggactgtccctggatactgcaacccttgagatgctgggtaaggcacgcaag
gttgttgtcaccaaggacgagaccaccattattgagggcgctggcgacgccgccgcactt
gagggccgcgtggcacagattcgcgccgagatcgcaaactccgattccgactacgaccgt
gagaagctgcaggagcgcctggcaaagctcgccggtggtgtagctgtgcttaaggctggc
gcggcaaccgaggttgagctgaaggaacgcaagcaccgcattgaggatgctgtgcgcaac
gcaaaggcagccgttgaagagggtattgtccccggcggcggcgtggcactgattcaggcg
ggtacgaaggtcttcgataagctcgacctgaagggtgacgaggcaaccggcgcgaacatt
gtgcgtgtggctattgatgcgccgctgaagcagatcgcaacgaacgctggccttgagcct
ggcgtggtggtcgataaggttcgttctttgcccgagggtaccggtctgaacgctgcaacc
ggcgagtacgaagaccttatggctgcgggtattaacgaccctgtgaaggtgacccgttcc
gctctgcagaacgcagcatcgatcgccggtctgttcctgaccaccgaggctgtggtggcg
aacaagcctgagcccgcatccgctgcggcaccggctgctgacccgatgggcggcatgatg
taa
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