Rothia dentocariosa: HMPREF0733_10618
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Entry
HMPREF0733_10618 CDS
T01343
Name
(GenBank) AMP-binding enzyme
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn00061
Fatty acid biosynthesis
rdn00071
Fatty acid degradation
rdn01100
Metabolic pathways
rdn01212
Fatty acid metabolism
rdn02024
Quorum sensing
rdn04146
Peroxisome
Module
rdn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HMPREF0733_10618
00071 Fatty acid degradation
HMPREF0733_10618
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HMPREF0733_10618
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF0733_10618
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rdn01004
]
HMPREF0733_10618
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rdn04147
]
HMPREF0733_10618
Enzymes [BR:
rdn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HMPREF0733_10618
Lipid biosynthesis proteins [BR:
rdn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HMPREF0733_10618
Exosome [BR:
rdn04147
]
Exosomal proteins
Exosomal proteins of breast milk
HMPREF0733_10618
Exosomal proteins of breast cancer cells
HMPREF0733_10618
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
YomX_N
Motif
Other DBs
NCBI-ProteinID:
ADP40076
LinkDB
All DBs
Position
complement(670794..672590)
Genome browser
AA seq
598 aa
AA seq
DB search
MTDPQYHDSHPHDAQASAQESQRPAPAQTTPDTASGQNPLAHRPWLKNYSPGVAVDVHLP
ETSLSHLIDDAVRDVPHKIALEFFGATTTYAELGSQIDRAAEGLRLAGVQAGDRVALILP
NCPQHIIAFYAILRLGAIVVEHNPLYTGAELRHMFEDHGAKAAIVWDKISGHITGLPADI
RPAHIYAVNLIKAMPALTRAALKLPVKKARSSREKLEGAAPGTTSWAHLLKSPPIDPDFK
RPTAHDVALLQYTSGTTGLPKGVMLTHRNLESNGRMGEAWIQPGNDESIYSVLPLFHAYG
MTLGVTIAALCRARLVLFPTVDMGLITKAMKKTRPTILPAVPPVYRRLMDVAKEQGISLQ
GVRYAVSGAMNLPPELVAEWEDASGGYMVEGYGLTECAPLVSCNPLNDTRRAGSIGIPFP
STDIRVVDPETLQDVPLGEEGELWVHGPQCFAGYWKREEDTQKTITADGWLRTGDIVRLD
EDYFIQIVDRIKEVIITGGFNVSPTEVETALKQHDSVADAAVVGIPQASGGEMVVAAVIP
AEGHAVDEHALREHCYARVTRYKVPRKIVAVDDLPRSMLGKILRRKVREQLIASGEFD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgactgacccgcaatatcacgactcgcatccgcatgatgcccaagcctccgcgcaagag
tctcaaagacccgcacccgctcaaactacacctgataccgcctccgggcagaacccgctg
gcgcatcgcccctggctcaaaaattattcacccggcgtcgccgtagacgttcacctgccc
gaaacctcgctaagccacctgattgacgatgctgtccgcgacgttccccacaagattgcc
ctcgaattctttggggcaaccaccacctacgccgaacttggcagtcagatcgaccgcgcc
gccgaagggctgcgcctggccggggtgcaggcgggggatcgggtcgccctgattctgccc
aactgcccgcagcatattattgccttctacgcgattctgcgcctgggcgcgatcgtcgtg
gaacacaaccccctctacaccggcgccgagttgcggcacatgttcgaggaccacggcgcg
aaggccgccatcgtgtgggataaaatttccgggcatattacgggcctgcccgcagacatc
agaccggcgcatatttacgccgtgaaccttatcaaagcgatgcccgccctcacccgcgcg
gcactcaaactgccggtcaaaaaggcacgcagttcacgagaaaaacttgaaggagccgcc
cccggaaccacaagctgggcgcatctgctcaagagtccaccgatcgaccccgactttaaa
cggcccaccgctcacgacgtagcgctcttgcagtacacctccggcaccaccggactgccc
aagggcgtgatgctcactcaccgcaacctcgaatcgaacgggcgcatgggtgaagcctgg
attcagcccggcaacgacgaaagtatttactcggtgctgccgctcttccacgcctatggc
atgaccttgggcgtaacgattgcggcgctgtgccgcgcccggctggtgctcttcccaacc
gtcgatatgggtctgattactaaggcgatgaagaagacccgccccacgattctgcccgca
gtaccgccggtctaccgccgcctgatggacgtcgccaaagagcagggcatctcgctgcag
ggagttcgctatgcggtttcgggcgccatgaacctgccgcccgagctggtggcagagtgg
gaggatgcatccggcgggtacatggttgaggggtacgggctgaccgagtgcgcgccgctc
gtctcatgcaatccgctcaacgatacgcgccgcgccgggtcaatcggcattcccttcccc
tcgaccgatattcgcgtggtagaccccgaaactcttcaggatgtgccgctcggcgaagag
ggtgagctgtgggttcacggcccgcaatgtttcgccgggtactggaaacgcgaagaagac
acgcagaaaaccattacggctgacggctggcttcgcaccggcgatattgtgcgcctggac
gaagactacttcattcagatcgtggatcgtattaaggaagtcatcattaccggcgggttc
aacgtttcacccaccgaagtggaaaccgccctgaaacagcacgattccgtggcggatgcg
gcggtcgtgggcatcccgcaggccagcgggggagagatggtggtcgccgccgtgattcct
gccgaaggacacgcggttgatgaacatgcgctgcgcgagcactgctatgcgcgcgtgacc
cgctataaggtgccgcgcaagattgtggcggtggacgatctgccccggtcgatgctcggc
aagattctgcgccgcaaggtacgtgaacagttaatcgccagcggggagtttgattaa
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