Rothia dentocariosa: HMPREF0733_10654
Help
Entry
HMPREF0733_10654 CDS
T01343
Name
(GenBank) YD repeat protein (3 repeats)
Organism
rdn
Rothia dentocariosa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Motif
Other DBs
NCBI-ProteinID:
ADP40112
UniProt:
E3H1I5
LinkDB
All DBs
Position
complement(709319..712567)
Genome browser
AA seq
1082 aa
AA seq
DB search
MPELKHVDPPQSSVDDNMSIGTADKPRAMPDVQFDDGASDNLRNALNSAADTIETQQGGR
DGLFDTARDKFEGKYAHDFHMCHVQLANNSANVVTMLRYGAKLVDYIKECAHVENENRKK
AREWENRNGLQQTWDGVVLNKHRPDYAPNPSKPAEPGSAPQRDVNAGAPDASGGTSSAIP
ENLDGYNTACVSYDNEAGLKHTDITNALNTYTSSCHHGSLDISETINSMAGWLQQSNQVN
TWVSGVAQDFRDAGSGTGNIKTVSNAYLDQRMQERGTGAPQVQKIEVHPAQVTGEIPTSG
FANDPVNVATGNFIEPETDLSFPGTFARNLNLKRMYNSLAVTNSQDIPSGVFGIGWSSTL
DQRLEFDADKASWFTADGRILTFAREGEGFARASGEAWWLTKAELGSDAYARIEALQRET
QRQLKNSRGLDESAVQAFMQEPFYWIVMNNAHESFGFSASGDWVSATDGHPSNTVVAFRD
AQGRVTDLVHPGSQRGIRVDYEELGQSTEAPEHRPISAYTYNTTGAEADTPLMAAEYSYE
GEYLTSVATNAGVRSYTHTDAGLIREVINANGIVEVTNTYDELGRVVHQLTEYGREVSYT
YTPSLVTIVADAETGDNSNLWTSDSKGRLIGITATDGSRQTMRYDSFGNRVGITERDGSR
TARVFDNRGRLKRERTPEGTDYTYGWDEHDRITGVSVRDARDPRNLGTPMTVSYEYADSV
NPNPSAVIDADGAQTLYDWDDRGLLTRVTEPTGVSTTFEYDAYGDLVLVTNGAGNTTTLI
RDDHGRVIGVIDPLGRRGTATYNSSGALASIENADGARWTFAYPEFAVESLPSLVRNSTN
TSGGCGNLPTSVTDPYGATIRFTYNAGGEIASVTNPLGHTTEGTFDTWGNLVGLTTASGA
VWNYVYDGLSQLVEATDPSGAATRYSYDLNGELSSVTDATGVEIKRRVDRQRGIEEIADA
FSSSFIHTDIFGRVTSEQKRARGGSSAKKADVESEFITYDVAGRPVEILDAAGGLTRCER
DGAGRVLRVISAEGRIETYDYDGAGRVISHAVGLDAPERYTDEEGVSRVVEPSCLGDNSP
GV
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctcaagcatgttgatcctccgcaaagctctgttgacgacaatatgagtatc
ggcacggctgataagccgcgcgctatgcctgacgttcagtttgatgatggggcatccgat
aacctcagaaatgcgctgaattctgccgcagacactatcgaaacccagcagggcgggcga
gacggtctttttgatactgcacgagataaatttgagggcaaatacgcccacgactttcat
atgtgccacgtacaacttgccaataactccgccaacgttgtgacgatgctccgttatggc
gcgaagctggtagattacatcaaagagtgcgctcatgttgaaaacgaaaaccgtaagaaa
gcccgggagtgggagaaccgcaacggtttgcagcaaacttgggatggtgttgttctcaac
aaacaccgtcccgattatgctcccaacccgtcgaaacctgctgagcccggctctgccccg
cagcgcgatgtcaatgctggcgcccctgatgcatccggcggcacttcctctgctattcca
gagaacctcgacggctacaatactgcctgtgtatcctacgacaacgaagcagggctcaag
cataccgacattacgaatgcgctaaacacctacacaagttcgtgccatcacgggtcgctc
gatatcagcgaaacaatcaacagcatggcggggtggcttcaacagagcaaccaggtcaat
acctgggtttctggagttgcccaggattttagggatgctgggtctggcaccggtaacatc
aaaaccgtctcgaatgcgtatctggatcagcgtatgcaggagcgtggaactggtgctcct
caggttcagaaaatcgaggttcatcccgctcaggtcacgggcgaaatccctacttccggc
ttcgcaaatgatccggtaaacgtggcaacgggtaacttcattgagcctgaaaccgacctt
tctttcccgggaacttttgcgcgtaatctgaacctgaaacgtatgtataacagcttggct
gtgactaactcgcaagatattccttcgggtgtttttggcatcggatggtcctctactctg
gatcagcgtcttgagtttgatgctgacaaagcatcatggtttaccgccgatgggcgcatc
ctcacgttcgcgcgtgaaggtgaaggattcgcgcgtgcctctggggaagcatggtggctg
acaaaggcagaactgggctctgatgcgtatgcgcgtatcgaagccttgcagcgtgaaaca
cagcgacagctcaagaattctcgtggcttagatgaatccgcagttcaagctttcatgcag
gaacccttctattggatcgtgatgaataatgctcacgaatcctttgggttcagcgcttct
ggggattgggtgagtgctactgatgggcacccatcaaatactgtggtcgcattccgcgac
gcgcaggggcgggtgacagatctggtgcatccaggatcccagcgcgggattcgtgtggac
tacgaagagctaggtcaaagcactgaggctcccgagcatcgcccgattagtgcttatact
tacaacacgactggcgccgaagctgatacgccgctaatggctgccgaatattcgtatgag
ggtgagtatctgacgagtgtggcaacaaatgcgggtgtccgttcgtatactcacacggat
gctggacttatccgtgaggttatcaacgccaatgggattgtagaggttaccaacacctac
gatgagctgggccgggtagttcaccagctcaccgagtatgggcgcgaagtttcgtacacc
tataccccgagcttggttactattgtggcggatgctgaaacaggggataactctaacctc
tggacaagcgattctaagggacgcttgatcggaatcaccgccaccgacggcagccgacag
accatgcggtacgattctttcggaaaccgtgtgggtattactgagcgcgatggttctagg
actgcgcgcgtattcgataaccgaggcaggctgaagcgtgaacgtactcccgagggtacc
gactacacctacgggtgggatgaacacgatcgcataaccggcgtatctgtgcgggatgca
cgtgatccccgcaatctgggtacgccaatgaccgtgagctatgaatatgcggattcggtg
aacccaaacccaagcgctgtgattgacgcagacggtgctcagacgctttatgactgggac
gataggggtcttcttacccgagtcactgagccaacgggtgtatccacaaccttcgagtac
gatgcttacggtgatctcgtcctcgtgacaaacggtgcgggtaatactacaaccttgata
cgtgatgaccacggacgtgttattggggttatagatccgcttggtcgtcgcggtacggcg
acgtacaattcttcaggtgcgcttgcaagtatcgaaaacgcagatggtgcccgctggact
tttgcgtaccccgagtttgccgtagaatcccttccctcgctggtacgtaacagcaccaat
acgtctgggggttgtggaaatcttcctacttcggtaacggatccctacggtgctaccatc
cggtttacctacaatgcaggcggagaaatcgctagtgtcaccaacccgctaggtcatacg
accgaaggaacttttgacacatggggtaaccttgttggcctcactaccgccagcggtgcc
gtatggaattacgtttatgatggtttgtctcagttggttgaggctactgacccgagcggt
gctgccacccggtattcctatgatttgaacggcgagttgtcgtcggtgacggatgcgacc
ggcgttgaaattaaacgcagggtagatcgtcagcgcggtattgaggagatcgcggatgcg
ttctcgtcctcgttcattcacacggatattttcggtcgggttacgtctgagcagaaacgt
gcccggggtgggtcttctgcgaagaaggccgatgtcgaaagcgagttcatcacttatgat
gttgcgggtcgcccggttgagattcttgacgccgccggtggtctgacccgttgtgaacgt
gatggtgccgggcgtgtgctgcgggtaatttctgctgaaggccgtatcgagacctacgac
tatgatggggccgggcgggtgatctctcatgccgttgggctggatgctcctgagcgttac
accgatgaagagggggtttcgcgggttgttgagccttcttgcttgggcgataactcgcct
ggagtatga
DBGET
integrated database retrieval system
