| Entry |
|
|---|
| Name |
(GenBank) ATP-dependent DNA helicase, RecQ family
|
|---|
| KO |
|
|---|
| Organism |
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:rdn00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0733_10665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:rdn03019]
HMPREF0733_10665
03400 DNA repair and recombination proteins [BR:rdn03400]
HMPREF0733_10665
Enzymes [BR:rdn01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0733_10665
Messenger RNA biogenesis [BR:rdn03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HMPREF0733_10665
DNA repair and recombination proteins [BR:rdn03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMPREF0733_10665
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
complement(721401..723533)
|
|---|
| AA seq |
710 aa
MPTLHENAQALLRKLTASPNASFHPGQFEAIEALVTDRRRTLVVQRTGWGKSAVYFISAL
LMRAQGSGVALIISPLLSLMRDQVQAAERAGVRAATVNSANVTEWEAIRARLDANDLDVL
LIGPERLNNPAFREEWMPYLQPRLGLLVVDEAHCISDWGHDFRPDYRRIGALIRELDTNV
PVLATTATANERVSRDIAEQLAAGANPEDVVVLRGSLTRDSLRLGVLQLPDEAQRLGWLV
EHLDTLPGSGIIYTLTVSAAEDTSRLLQTAGHKVLAYTGKTDPDERREAEEALKTNRVKA
LVATSALGMGFDKPDLGFVVHLGAPSSAVSYYQQVGRAGRGTDHADVLLLPGREDRAIWE
YFATASMPNEQNAYAVCEALADEPDGLSIPALEARVQLRRSTLELLLKVLDVEDAVRKIG
SRWYSTGTPWSYDAPRYRAVAQARVREQEAMLAYESTEGCRMVFLARELDDTTAAPCGKC
DRCAGPWYPEQVSERAVQQAQGTLNAVGVEIAPRGMWPTGLQELAGENAPKGKIPLSERA
EPGYALARLSDVGWGSRVRELLATDESGEPLDTPVPQALGQACVRVLAAWDWGETGRPET
VLTVPSPVRPTLARSLGEGLAHVGKLVYLGEAELAAEPRFFGGNSVFRCADVMRSYQIPP
EVIERLREHPGPVLLVSDIVDSRWSITVLAQRLRVSGASAVYPFALGVTH |
|---|
| NT seq |
2133 nt +upstreamnt +downstreamnt
atgccaacactccatgaaaacgcccaagccctgctcagaaagctcaccgcaagcccgaat
gcgagctttcaccccgggcagttcgaggctatcgaggcgcttgtcaccgaccgccgccgc
accctcgtggtacagcgtacaggctggggaaaatctgccgtgtattttatttcggcgctt
ctgatgcgtgcccaaggttccggggttgcccttattatctccccgctgctttcgctcatg
cgcgaccaggtgcaggcagccgaacgcgccggggttcgtgccgctacggtgaactccgct
aacgtgaccgaatgggaggcaatacgcgcccgccttgatgcaaacgatctggacgttctc
ctcattggacccgaacgactcaataaccccgcatttcgtgaagagtggatgccttatctt
caaccgcggctcggtcttctggtggttgatgaagcgcactgtatctccgattgggggcac
gactttcgccccgattaccggcgcatcggggcacttattcgtgagctcgatacgaacgtt
cccgtactcgcgacgaccgcaaccgcgaacgaacgtgtaagccgcgatattgccgaacag
cttgccgcaggcgccaaccccgaggatgttgtggtgctacgcggttcgctcacccgcgat
tcgctaaggctgggcgtgctgcagctgcccgacgaagcgcagcgtctaggctggctggtt
gaacaccttgatacgctgccgggctcaggaattatctataccctgacagtatccgccgcc
gaagacacctcccggctgctgcaaaccgccgggcacaaggttcttgcgtacaccggaaaa
accgatcccgatgaacgccgcgaagccgaagaagccctcaaaaccaaccgggttaaggcg
cttgttgccacgagtgccctcggtatgggattcgacaaaccggatctggggtttgtggtg
catcttggggcaccttcttcggcggtgagctactaccagcaggtaggccgtgccggtcgc
ggcaccgaccatgcggatgtacttctgctgccggggcgcgaagaccgcgcgatctgggag
tactttgcgaccgcatccatgcccaacgaacagaacgcctacgccgtgtgtgaggcgctg
gcggatgagcccgatgggctttctatacccgcgctggaggcacgtgtacagttacgccga
agcaccttagagcttctgctcaaagtactcgatgttgaggatgcggtgcgcaagatcggc
tcacgctggtactccaccggtactccctggagctacgatgcgccgcgataccgtgccgtg
gcgcaggcgcgcgttcgagagcaagaggccatgctcgcctacgaaagtaccgaagggtgc
cgcatggtctttctggcacgcgagctggacgataccacggcggctccgtgcggaaaatgc
gataggtgcgcgggcccctggtatcccgaacaggtctctgagcgcgccgtgcagcaggct
caaggaaccctcaacgcggttggcgtagaaatagccccgcgcggcatgtggcctaccggg
ctacaggagctcgcgggagagaacgcgccgaagggtaagattccgttgtcggagcgcgcc
gaaccgggttacgcgctggcacgcctcagcgatgtggggtggggcagccgtgtgcgtgaa
cttttggcgaccgacgaatccggagaacctctcgatacgcccgttccccaagccctcggg
caggcctgcgtgcgggttcttgcggcatgggactggggcgaaaccggccgtcccgaaacc
gtacttacggtaccgtctccggtgcgtcccacgttagcgcgctcgttgggggaggggctg
gcccatgtcggtaaactcgtgtatttgggcgaggctgagctggccgccgaaccgcgtttc
ttcggcggtaacagtgttttccgatgcgccgatgtcatgcgttcctaccagattccgcct
gaggtaattgagaggctgcgtgagcatccgggacctgtgcttttagtgagcgatattgtg
gattcgcgctggagcatcaccgtgttggcgcagcggctgcgggtgagcggagcatccgcc
gtataccccttcgcattgggtgtgacacactga |
|---|
