Rothia dentocariosa: HMPREF0733_10703
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Entry
HMPREF0733_10703 CDS
T01343
Symbol
clpC
Name
(GenBank) negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
rdn
Rothia dentocariosa
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rdn03110
]
HMPREF0733_10703 (clpC)
Chaperones and folding catalysts [BR:
rdn03110
]
Heat shock proteins
HSP100
HMPREF0733_10703 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
TniB
UVR
ATPase_2
AAA_14
nSTAND3
AAA_18
IstB_IS21
TsaE
bpMoxR
NACHT
AAA_28
DUF99
Mg_chelatase
AAA_19
Zeta_toxin
AAA_24
DNA_pol3_delta2
ABC_tran
AAA_23
T2SSE
NBD_SMAX1
NABP
Motif
Other DBs
NCBI-ProteinID:
ADP40161
UniProt:
E3H1U8
LinkDB
All DBs
Position
complement(760248..762800)
Genome browser
AA seq
850 aa
AA seq
DB search
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHLLLGLIHEGEGIGARALESLGVTLNAVR
EQVQSIVGPSPQAPSGHIPFTPRAKKVLELSMREAIQLNHGYIGTEHILLGMVRASEGVA
NQVLSKVGVQGAEVRQAVMDLISGYPGNNENKETAGVGAGNSREGTPAGSTILDQFGRNL
TAAAREGQLDPVIGRHHEMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDV
PETLKDKHLYTLDLGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAA
EGAIDAASILKPMLARGELQTIGATTLDEYRKHIEKDAALERRFQPIQVDEPSQELAVQI
LKGVRDKYEAHHRVTITDESIEAAVNLAARYISDRFLPDKAVDLIDEAGARLRIKRMTAP
PEIKILDEKASKLRTQKEDAIKGQDYEKAAALRDQEQKVLAEKAEAEKAWRENGDAFGEV
TPEVISEVLASSTGVPVYKITEEESSRLIKMEDELHKRVIGQDNAIKALSRAIRRTRAGL
KDPRRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDALITLDMSEYQEKHTVSRLFGAPP
GYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHTDLFNSLLQILEDGRLTDSQGRVVDFKN
TVIIMTTNLGSRDVNRRVPVGFQAMDHGDADYERMQARVMENLKEHFRPEFLNRVDDIIV
FPQLSENEILQIVDLFVGRLAKRLADQEMSIELTDAAKVLMASKGYDPAMGARPLRREMQ
RNIEDALSEKILFGEIKPGEKITVGVEGEGDDAKFVFSSQQMRDLPLETVNKMAESAVEE
AEQITGGASD
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacgctttaccgaccgagctcggcgcgttgtggtgcttgcccaagaagaagca
cgcatgctcaaccacaattacatcggcaccgagcatctgctgctcgggctgattcacgag
ggcgagggcatcggtgcccgtgctcttgagtccctcggggttaccctgaatgccgtgcgc
gaacaggtgcagagcattgtgggccccagcccccaggcgccaagcggtcacattcccttc
accccgcgcgccaagaaggtcctcgaactttccatgcgtgaggccattcagcttaaccac
ggttatatcggcaccgaacatatcctgctgggcatggtgcgcgcctccgagggcgtggca
aaccaggttctctccaaagtaggcgtgcagggcgccgaggttcgccaggccgtgatggat
cttatttccggataccccggcaacaacgagaataaggaaaccgccggtgtgggcgcaggc
aactcccgtgagggcaccccggcgggctcgacaattctcgatcagttcgggcgtaacctc
accgccgccgcacgcgaaggtcagcttgacccggtgattggtcgtcaccacgagatggaa
cgcgtaatgcaggttctctcacgccgcaccaagaacaaccccgtgcttatcggcgaaccc
ggtgtcggtaaaaccgccgttgttgagggcttggcgcaggccatcgtacacggcgatgtt
cccgaaactctcaaagataagcacctgtacaccctggatttgggatccttggtcgcgggc
tctcggtaccgcggtgactttgaggaacgcctcaagaaggtgctcaaggagattcgcacc
cgcggcgacattatcctgttcattgacgagattcacactctcgtcggtgccggtgccgca
gagggcgctatcgacgccgcctccatcctgaagccgatgctggctcgcggcgagttgcag
accatcggtgccaccaccttggacgagtatcgcaagcacattgagaaggacgccgcactg
gaacgccgcttccagccaattcaggtggacgagccttctcaagagctcgccgtgcagatt
cttaagggtgtgcgtgataagtacgaggctcaccaccgcgtaaccattaccgacgagtcg
atcgaggctgccgtgaacttggcggcacgctatatttccgaccgattcttgccggataag
gccgttgacctgattgatgaggcgggcgctcgcctgcgcatcaagcggatgaccgccccg
cccgagattaagattcttgacgagaaggcgtcgaagctgcgcacgcagaaggaagacgct
atcaagggccaggattacgagaaggccgccgcgctgcgcgatcaagagcaaaaggtactc
gccgaaaaggccgaggctgagaaggcttggcgcgaaaacggcgatgctttcggcgaggtg
acccccgaggttatctctgaggtgctcgcatcctcaacgggtgttccggtgtacaagatc
accgaggaagagtcctcgcgtctgatcaagatggaggacgagctgcacaagcgcgtgatc
ggtcaagacaacgctatcaaggctctctcccgtgcgattcgccgcacccgtgccggtctg
aaggatccgcgccgccccggtggctcgtttatcttcgctggtccaaccggtgttggtaag
accgagcttgcgaaagctttggcggaattcctcttcggcgatgaagacgccctgattacc
ctggatatgtccgaataccaggagaagcacactgtgtctcgactcttcggtgcgcctccc
gggtacgtgggttacgacgagggcggtcagctgaccgagaaggtgcgccgcaagccgttc
tcggtggtgctcttcgatgaggtcgagaaggctcacaccgatctcttcaactcgctgctg
cagattcttgaagacggccgcctgaccgactcacagggtcgcgtggtggacttcaagaac
accgtgatcattatgaccacgaacctcggctcgcgcgatgtgaaccgtcgcgttcccgtg
ggctttcaggcgatggatcacggcgatgccgattacgagcgcatgcaggcccgcgtgatg
gagaacctcaaggagcacttccgccccgagttcctgaaccgcgtggacgatattatcgtg
ttcccgcagctctccgagaacgagattctgcagatcgtggatctctttgtgggccggttg
gcaaagcgcttggcagatcaggaaatgtcgatcgagcttacggatgccgcaaaggttctc
atggcctcgaagggttacgacccggcgatgggcgcccgcccgctgcgccgcgaaatgcag
cgtaatattgaggatgctctctccgagaagatcctcttcggcgaaatcaagcccggcgag
aagattaccgtgggtgtcgagggtgaaggcgacgatgcgaagttcgtcttctcctcgcag
cagatgcgggatttacccctggagactgtcaataagatggcggagtctgccgtggaagaa
gccgagcagattaccggaggggcatctgactag
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