KEGG   Rothia dentocariosa: HMPREF0733_10703
Entry
HMPREF0733_10703  CDS       T01343                                 
Symbol
clpC
Name
(GenBank) negative regulator of genetic competence ClpC/MecB
  KO
K03696  ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
rdn  Rothia dentocariosa
Brite
KEGG Orthology (KO) [BR:rdn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:rdn03110]
    HMPREF0733_10703 (clpC)
Chaperones and folding catalysts [BR:rdn03110]
 Heat shock proteins
  HSP100
   HMPREF0733_10703 (clpC)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 Clp_N ClpB_D2-small AAA AAA_5 AAA_16 AAA_22 Sigma54_activat TniB UVR ATPase_2 AAA_14 nSTAND3 AAA_18 IstB_IS21 TsaE bpMoxR NACHT AAA_28 DUF99 Mg_chelatase AAA_19 Zeta_toxin AAA_24 DNA_pol3_delta2 ABC_tran AAA_23 T2SSE NBD_SMAX1 NABP
Other DBs
NCBI-ProteinID: ADP40161
UniProt: E3H1U8
LinkDB
Position
complement(760248..762800)
AA seq 850 aa
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHLLLGLIHEGEGIGARALESLGVTLNAVR
EQVQSIVGPSPQAPSGHIPFTPRAKKVLELSMREAIQLNHGYIGTEHILLGMVRASEGVA
NQVLSKVGVQGAEVRQAVMDLISGYPGNNENKETAGVGAGNSREGTPAGSTILDQFGRNL
TAAAREGQLDPVIGRHHEMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDV
PETLKDKHLYTLDLGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAA
EGAIDAASILKPMLARGELQTIGATTLDEYRKHIEKDAALERRFQPIQVDEPSQELAVQI
LKGVRDKYEAHHRVTITDESIEAAVNLAARYISDRFLPDKAVDLIDEAGARLRIKRMTAP
PEIKILDEKASKLRTQKEDAIKGQDYEKAAALRDQEQKVLAEKAEAEKAWRENGDAFGEV
TPEVISEVLASSTGVPVYKITEEESSRLIKMEDELHKRVIGQDNAIKALSRAIRRTRAGL
KDPRRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDALITLDMSEYQEKHTVSRLFGAPP
GYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHTDLFNSLLQILEDGRLTDSQGRVVDFKN
TVIIMTTNLGSRDVNRRVPVGFQAMDHGDADYERMQARVMENLKEHFRPEFLNRVDDIIV
FPQLSENEILQIVDLFVGRLAKRLADQEMSIELTDAAKVLMASKGYDPAMGARPLRREMQ
RNIEDALSEKILFGEIKPGEKITVGVEGEGDDAKFVFSSQQMRDLPLETVNKMAESAVEE
AEQITGGASD
NT seq 2553 nt   +upstreamnt  +downstreamnt
atgtttgaacgctttaccgaccgagctcggcgcgttgtggtgcttgcccaagaagaagca
cgcatgctcaaccacaattacatcggcaccgagcatctgctgctcgggctgattcacgag
ggcgagggcatcggtgcccgtgctcttgagtccctcggggttaccctgaatgccgtgcgc
gaacaggtgcagagcattgtgggccccagcccccaggcgccaagcggtcacattcccttc
accccgcgcgccaagaaggtcctcgaactttccatgcgtgaggccattcagcttaaccac
ggttatatcggcaccgaacatatcctgctgggcatggtgcgcgcctccgagggcgtggca
aaccaggttctctccaaagtaggcgtgcagggcgccgaggttcgccaggccgtgatggat
cttatttccggataccccggcaacaacgagaataaggaaaccgccggtgtgggcgcaggc
aactcccgtgagggcaccccggcgggctcgacaattctcgatcagttcgggcgtaacctc
accgccgccgcacgcgaaggtcagcttgacccggtgattggtcgtcaccacgagatggaa
cgcgtaatgcaggttctctcacgccgcaccaagaacaaccccgtgcttatcggcgaaccc
ggtgtcggtaaaaccgccgttgttgagggcttggcgcaggccatcgtacacggcgatgtt
cccgaaactctcaaagataagcacctgtacaccctggatttgggatccttggtcgcgggc
tctcggtaccgcggtgactttgaggaacgcctcaagaaggtgctcaaggagattcgcacc
cgcggcgacattatcctgttcattgacgagattcacactctcgtcggtgccggtgccgca
gagggcgctatcgacgccgcctccatcctgaagccgatgctggctcgcggcgagttgcag
accatcggtgccaccaccttggacgagtatcgcaagcacattgagaaggacgccgcactg
gaacgccgcttccagccaattcaggtggacgagccttctcaagagctcgccgtgcagatt
cttaagggtgtgcgtgataagtacgaggctcaccaccgcgtaaccattaccgacgagtcg
atcgaggctgccgtgaacttggcggcacgctatatttccgaccgattcttgccggataag
gccgttgacctgattgatgaggcgggcgctcgcctgcgcatcaagcggatgaccgccccg
cccgagattaagattcttgacgagaaggcgtcgaagctgcgcacgcagaaggaagacgct
atcaagggccaggattacgagaaggccgccgcgctgcgcgatcaagagcaaaaggtactc
gccgaaaaggccgaggctgagaaggcttggcgcgaaaacggcgatgctttcggcgaggtg
acccccgaggttatctctgaggtgctcgcatcctcaacgggtgttccggtgtacaagatc
accgaggaagagtcctcgcgtctgatcaagatggaggacgagctgcacaagcgcgtgatc
ggtcaagacaacgctatcaaggctctctcccgtgcgattcgccgcacccgtgccggtctg
aaggatccgcgccgccccggtggctcgtttatcttcgctggtccaaccggtgttggtaag
accgagcttgcgaaagctttggcggaattcctcttcggcgatgaagacgccctgattacc
ctggatatgtccgaataccaggagaagcacactgtgtctcgactcttcggtgcgcctccc
gggtacgtgggttacgacgagggcggtcagctgaccgagaaggtgcgccgcaagccgttc
tcggtggtgctcttcgatgaggtcgagaaggctcacaccgatctcttcaactcgctgctg
cagattcttgaagacggccgcctgaccgactcacagggtcgcgtggtggacttcaagaac
accgtgatcattatgaccacgaacctcggctcgcgcgatgtgaaccgtcgcgttcccgtg
ggctttcaggcgatggatcacggcgatgccgattacgagcgcatgcaggcccgcgtgatg
gagaacctcaaggagcacttccgccccgagttcctgaaccgcgtggacgatattatcgtg
ttcccgcagctctccgagaacgagattctgcagatcgtggatctctttgtgggccggttg
gcaaagcgcttggcagatcaggaaatgtcgatcgagcttacggatgccgcaaaggttctc
atggcctcgaagggttacgacccggcgatgggcgcccgcccgctgcgccgcgaaatgcag
cgtaatattgaggatgctctctccgagaagatcctcttcggcgaaatcaagcccggcgag
aagattaccgtgggtgtcgagggtgaaggcgacgatgcgaagttcgtcttctcctcgcag
cagatgcgggatttacccctggagactgtcaataagatggcggagtctgccgtggaagaa
gccgagcagattaccggaggggcatctgactag

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