Rothia dentocariosa: HMPREF0733_10706
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Entry
HMPREF0733_10706 CDS
T01343
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF0733_10706 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rdn01007
]
HMPREF0733_10706 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rdn03016
]
HMPREF0733_10706 (lysS)
Enzymes [BR:
rdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HMPREF0733_10706 (lysS)
Amino acid related enzymes [BR:
rdn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HMPREF0733_10706 (lysS)
Transfer RNA biogenesis [BR:
rdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HMPREF0733_10706 (lysS)
Prokaryotic type
Other AARSs
HMPREF0733_10706 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Peptidase_C7
Motif
Other DBs
NCBI-ProteinID:
ADP40164
UniProt:
E3H1V1
LinkDB
All DBs
Position
complement(764245..765828)
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AA seq
527 aa
AA seq
DB search
MSNEQSATPAIADMSEQMKIRLEKRAKFLETAGEAYPVGLLDAEGKRIEPDHIADIRAQY
DPKLESGELTAGDETDHVVHVPGRVVFVRNTGKLCFASLQAGTNGDRIQAMLSLNEVGEQ
SLADWKSLVDLGDHVYVTGRVVVSRRGELSIMVREWRMAAKSIRPMPVLHKDLNEETRVR
RRYLDLMVRPEARDLVKKRALITRTVRRVLEDHGYIELETPVLQLVHGGATARPFRTHLN
AFDQPMTMRIATELPLKRAVVGGIERVYEIGRVFRNEGVDSTHSPEFTTLECYEAYADQY
VMAERMQEIIVACAQELGVTAIETEDGTIDLGGEWAWLSVYPGLSEAVGVEITPDTPAET
LREIAAKHEVEVDPAWDAEKLVIELFGEIVEPTLLNPTFVYNYPPSAQPLARPNRDGSRT
IEAWDLIIGGMERGTAFSELIDPVIQRERLTEQSHKAAAGDDEAMELDEDFLRALEHGAP
PMGGLGLGVDRLIMLLAGEQDPERPGTVVRQPGIRETILFPLMKPES
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaacgagcagagcgccacaccggccattgcagatatgtccgagcagatgaagatt
cgcttggagaagcgcgctaagttcctggagaccgcgggtgaagcgtatcccgttgggctt
ctggatgccgaaggtaagcgcatcgaaccggatcatatcgccgatattcgcgctcaatac
gacccgaaattagagtccggcgagctcaccgccggggatgaaaccgaccatgtggtgcat
gtgccgggccgtgttgtgttcgtgcgcaataccggtaaactctgctttgcatccctgcaa
gcgggtacgaatggcgaccgcattcaggcgatgctctcgctcaatgaggttggtgaacag
tcgcttgccgactggaaatccctggtggatttgggcgatcacgtgtatgtgaccggccgc
gtggtggtctctcgccgcggcgaactgtcgattatggtgcgtgagtggaggatggccgcg
aagtcgattcgccccatgcctgtgctgcacaaggatttgaacgaggaaactcgggtgcgc
cgtcgctacctggacttgatggttcgccctgaggcgcgtgacctggtgaaaaagcgcgct
ctgattacccgcactgtgcgccgcgtgctggaagatcacggctatattgagctggaaacc
ccggtgctgcagctggtgcacggcggcgcgacggctcgcccgttccgcactcatctgaat
gccttcgaccagcctatgacgatgcgcatcgccaccgaacttccgcttaagcgtgccgtg
gtgggcggcattgagcgcgtctacgaaattggtcgcgtattccgcaacgagggcgtggat
tcgacgcacagccccgaatttacaaccctggaatgctacgaagcctacgccgatcagtat
gtgatggccgagcgcatgcaggagattattgttgcgtgcgcacaggagctcggggttacc
gcgattgagactgaggacggcacgatcgacctgggcggtgagtgggcgtggctgagcgtc
taccccggactgtctgaggccgtgggcgttgaaataaccccggacacccccgctgagacg
ctgcgcgagatcgctgccaagcatgaggttgaggtggatcccgcctgggatgctgagaaa
cttgtgattgagcttttcggcgaaatcgtggagccaactctgctgaacccgacctttgta
tataactacccgccaagcgcccagcctctggcgcggccaaaccgcgatggttcccgcacg
attgaggcgtgggatctgattattggcggtatggagcgcggtaccgcgttctctgagctg
atcgaccctgtgattcagcgcgagcgtttgactgagcagtcccataaggccgctgcgggc
gatgacgaggcgatggaacttgatgaggacttcttacgcgccctagagcacggtgcaccg
ccgatgggcggtctcgggctgggcgttgaccgtctgattatgcttttggcgggtgaacag
gaccctgaacgccctggaaccgtggtgcgtcagccaggtattcgtgaaactattttgttc
ccgctgatgaaaccggagtcgtaa
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