Rothia dentocariosa: HMPREF0733_10727
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Entry
HMPREF0733_10727 CDS
T01343
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
rdn
Rothia dentocariosa
Pathway
rdn00550
Peptidoglycan biosynthesis
rdn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF0733_10727 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rdn01002
]
HMPREF0733_10727 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rdn01011
]
HMPREF0733_10727 (dacB)
Enzymes [BR:
rdn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HMPREF0733_10727 (dacB)
Peptidases and inhibitors [BR:
rdn01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
HMPREF0733_10727 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
rdn01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HMPREF0733_10727 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ADP40185
UniProt:
E3H237
LinkDB
All DBs
Position
784200..785882
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AA seq
560 aa
AA seq
DB search
MRVTGSVFRGGIRYALKMRSPQPINTPFTRRALLGAAPALFLAACSNPSGGQSQSGTASV
TPSVTPTPSPTPVLNTQQLQDLKIQLDKLFQERPYPAHSMLVTALDGTRELYADAPDTPR
LPASNMKILTYFALVQTAPERTFTTSVVQGKNGLFLVAGGDTLLVEGATEPATADSPTMR
AGLSTLAADTVQQMNERKVAHGTFPVYLDTTIYTGSATNPGWEPGDLESGQITPINPIAL
ASHTVPGQSTPDKPARPQDAGIAALEAFVKVLNKASEEHAEVKAGYVFTVADRRPREADA
EQIAQVQSASALDQAFVMMLESDNVLAEVLGRNMAIAAGREGSASEAQKLVREKLQEAKI
SVTGLVQADVSGMSLQNRVTARTLAQTLGALAAHPKHDELERRFPVAGVSGTLKDRFSGE
ANKYARGHVAAKTGTLFTAISLSGYATRPDGTRLIFVSLLNDVGGAEALPGAKDTVDSAA
AIVAVRTEPPANPTGTPAPSGSQVPGSSSAPDATDSGSAPNSSQAPDGSSSASPAGGSAP
QEDAPSQAVGQNPAEVPSSQ
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtaaccggctcggtatttcgcggcggaattcgttatgctcttaagatgcgttca
ccccaaccgataaacaccccgttcactcgccgcgccctgctcggtgcagcacccgcgcta
ttccttgccgcatgctcaaacccaagcggcggacagtcgcagagcggcaccgcatccgta
accccgtcggtcacacccacgccgagccccactccggtactgaatactcagcagcttcaa
gacctgaaaatccagcttgataagctctttcaggagcgcccctaccccgcccattccatg
cttgtgaccgccctcgacggcacacgtgagctctatgcggatgccccggataccccgcgc
ctgcctgcctcaaatatgaagattctgacctattttgcgctcgtgcagaccgcgccggaa
cgcactttcacaacctcggtggtgcagggtaaaaatgggctgtttctggtggcaggcggc
gacactctgctcgtggaaggagccacggaaccggccaccgcggattcgccgacgatgcgc
gccgggctgagcacgctcgctgcggataccgtacagcagatgaacgaacgcaaggtcgcg
cacggcaccttccccgtctacctcgacaccacgatttacacgggttccgcgacaaacccc
ggctgggagcccggcgacctcgaatccgggcagatcaccccgattaacccgatcgcgctg
gcctcgcacaccgtgcccgggcagtccacccccgacaaaccggcacgcccgcaagacgcc
ggaatcgccgccctagaagcgttcgtgaaggtgctcaataaggcgagtgaagagcatgca
gaggtcaaagcagggtacgtatttacggttgccgaccgccgcccccgtgaggccgatgct
gagcagatcgctcaggttcagtcggcatccgcgctcgatcaggcctttgtgatgatgtta
gagtccgataatgtgctcgccgaggtgctggggcgcaatatggcgatcgccgcggggcgt
gagggcagcgcatccgaggcgcagaaacttgtgcgcgagaaactgcaggaggcgaagatt
tcggttaccgggttggtgcaggcggatgtgagcggtatgtccctgcagaaccgggtgacg
gcacgcaccctggcgcagaccttgggggcgttagcggcgcatccgaagcatgacgagctt
gagcgcagattcccggttgcgggtgtttcgggtacgctcaaggatcgttttagcggggaa
gcgaataagtatgcgcgcgggcatgtggcggcaaaaaccggcacgctgttcacagccatt
tcgttatcggggtatgcgacccgcccagacggcacacgcctgattttcgtgagtctgctc
aacgatgtcggcggtgcggaagctctgcccggcgcgaaggatacggtcgatagcgccgct
gcgatcgtggcggtacgtaccgaacctcccgcgaaccccacgggaacacccgcaccttcg
ggctcgcaggtaccgggctcatcctcggctcccgatgctacagattcgggttccgccccg
aattcctcgcaggccccggatggttcgtcttccgcttcgcccgccggtggcagcgcgccg
caggaggatgcgccctcccaggcagtgggtcaaaatccagccgaggttcccagctcgcag
tag
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