Rothia dentocariosa: HMPREF0733_10898
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Entry
HMPREF0733_10898 CDS
T01343
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rdn
Rothia dentocariosa
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rdn03032
]
HMPREF0733_10898 (gyrB)
03400 DNA repair and recombination proteins [BR:
rdn03400
]
HMPREF0733_10898 (gyrB)
Enzymes [BR:
rdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF0733_10898 (gyrB)
DNA replication proteins [BR:
rdn03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0733_10898 (gyrB)
DNA repair and recombination proteins [BR:
rdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0733_10898 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
DUF4777
Motif
Other DBs
NCBI-ProteinID:
ADP40355
UniProt:
E3H316
LinkDB
All DBs
Position
complement(950250..952280)
Genome browser
AA seq
676 aa
AA seq
DB search
MTSEQPHEYGASDITVLEGLEAVRKRPGMYIGSTTERGLHHLVYEVVDNSVDEALAGYAS
HIEVTIQADGGVRVQDDGRGIPVDEHPTEHKSTVEVVMTVLHAGGKFGGGGYAVSGGLHG
VGISVVNALSKKVITEVHRQGYSWHISFANGGIPDGPLRRGKVSQKTGTIQTFYPDPEIF
ETVEFDFETLRARFQQMAFLNKGLTISLTDERDQFEGGDEVAEEEDEKDKVLPLNRVGAN
AEGHRTVTYRYDNGLFDYVHFLNAGSKTVINEDIIYFEAEDTVRHMALEVAMQWTGSYKE
SVHSYANTINTHEGGTHEEGFRAALTSLVNRYARENKLLRDKDDNLTGEDVREGLTAVIS
IKISEPQFEGQTKTKLGNSEAKSFTQREINDHMADWFDRNPAVAKDVVRRAITAAQARMA
ARKARETTRRKGLLETSSMPGKLKDCASKDPSISEIYLVEGDSAGGSAVQGRDPNSQAIL
PLRGKILNVERARLDRALSNAEIQAMITAFGTGIGDDFDLEKARYHKIVLMADADVDGQH
ITTLLLTLLFRFMRPLIEAGYVYLAQPPLYRIKWSNAPHDYVFSDAERDEALARGQAKNQ
RLPKDNGIQRYKGLGEMDYTELWDTTMDPQRRTLLQVKMEDAAAADQIFSVLMGEDVEAR
RDFIQQNAKDIRFLDI
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
gtgacatctgaacaaccccatgaatacggcgcatctgacattaccgttttggagggtctg
gaagcggttcgtaaacgtcccggtatgtatatcggctcgacaaccgaacgtggtctacac
catctggtctacgaggtggtcgataactctgtagatgaggcgctcgcaggctacgcaagc
catattgaagttacaattcaggccgatggtggtgtgcgcgttcaagatgatggccgcggt
attcccgtggatgagcatccaaccgagcataaatccacggtcgaggtcgttatgactgtt
cttcacgctggcggtaaattcggcggcggcggatatgccgtttccggtggtttgcacggc
gtgggtatttctgtcgttaatgcgctctcaaaaaaggttataaccgaagtccaccgtcag
ggttattcctggcacatttcttttgctaacggtggtattcctgatggtcccctgcgccgc
ggtaaagtctctcaaaagaccggtactattcagacgttctaccctgatcccgagattttt
gagaccgttgagtttgattttgagactctgcgtgccaggttccagcagatggcgttcctg
aacaagggactgacaatttctctcaccgatgagcgtgaccagtttgaggggggcgacgag
gtcgccgaagaagaggatgaaaaagataaagttcttcccctcaaccgtgtaggtgcaaac
gctgaagggcaccgcacagtcacctatcgttacgataatggtcttttcgactacgtgcac
ttcctcaacgcgggttcaaaaaccgttattaacgaagatattatctactttgaggctgaa
gacaccgtgcgtcatatggcgcttgaggtggctatgcagtggaccggttcttataaagaa
tcggtgcactcctatgcgaatacgatcaacactcacgaaggcggtactcatgaagagggt
ttccgtgctgcgctgacgtctctggtgaatcgttatgctcgcgagaataaactgctgcgc
gataaagacgataatctcaccggtgaagacgtgcgtgagggtctgactgcggttatttcg
attaagatttccgagccgcagttcgaagggcagacgaagacaaagctcggtaactccgaa
gcaaaatcctttacccagcgcgagattaacgatcatatggccgattggttcgatcgtaac
cccgctgtcgccaaggatgtggtgcgccgtgctattacggcggcacaggcacgtatggcg
gcacgtaaagcgcgagagacaactcgacgtaagggtctgctggaaaccagctccatgccc
ggtaaactcaaggactgtgcttcaaaggacccgtcgatctccgaaatttatctggtggag
ggtgactccgcaggcggttcggcagtgcaggggcgcgatccaaatagccaagctattttg
ccgctgcgcggtaagatcctcaatgtggagcgtgctcgcctcgatcgagcgctttccaat
gctgagattcaggctatgattacggccttcggcaccggtatcggcgacgatttcgacctg
gagaaggctcgctaccacaagatcgttcttatggccgatgccgatgtggacggccagcat
atcaccaccctgttactgaccctgctcttccgctttatgcggccgctcatcgaagccgga
tatgtttatttggcacagcctccgctgtatcgcatcaagtggtcgaacgctccgcatgat
tatgtgttctcggatgccgagcgagatgaggctctagcgcgcggtcaggcaaagaatcag
cgtctacccaaagacaacggcattcagcgttataagggtcttggcgagatggactatacc
gagctgtgggataccacgatggatcctcaacgccgtaccctgcttcaggtgaagatggag
gatgcggctgctgccgatcagatcttctcggttctgatgggtgaagatgtggaagcacgc
cgcgactttattcagcagaacgccaaggacattcgattcctcgatatctaa
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