Rothia dentocariosa: HMPREF0733_11239 Help Entry HMPREF0733_11239  CDS       T01343                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism rdn  Rothia dentocariosa Brite KEGG Orthology (KO) [BR:rdn00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:rdn03400]     HMPREF0733_11239 Enzymes [BR:rdn01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      HMPREF0733_11239     5.6.2.6  RNA 3'-5' helicase      HMPREF0733_11239 DNA repair and recombination proteins [BR:rdn03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     HMPREF0733_11239 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc DEAD Helicase_C ResIII PhoH DUF5594 AAA_25 DUF6406 Motif Other DBs NCBI-ProteinID:  ADP40696 UniProt:  E3H4R3 LinkDB All DBs Position complement(1343485..1349235) Genome browser AA seq 1916 aa AA seqDB search MMYVMYIFNYYGPITRKSLVFAHNCPCNMCHAQKTFKENPGHIRDNGTMPDALEPFSPAT QQWFRNAFGTPTAAQEGAWESISKGENALIIAPTGSGKTLAAFLWALDALYRDKSTEPDQ RELTISAQGRKNGDAGETRKTQKQRAGGTRILYVSPLKALGADVERNLRAPLAGIAHTAK ESGQTPPDITVGIRSGDTPARERRQLISNPPDILLTTPESLYLMLTSAARSTLTGVTTVI VDEVHALAGTKRGAHLAVSLERLDQLVERPVQRIGLSATVNPPEAVATFLGGVHPVTIVA RQVPKRWDLRLSVPVPDMAALGGANDYGQGSYAPEEQRAPRGQDSPSPAPDAPDLQVQAA DDAPLYTLADAIGTFPGEEGLSLELPNSSAEQDGAASATASAGARKPDSEGERASGYRAS IWPYVQERIVDDIENNRSTIVFVNSRGLAEKLTAALNDIHVRRELSRRELAGEPLPDIGE EPDIAPLARAHHGSVAKDQRTLIEESLKNGSLRCVVATSSLELGIDMGHVDAVIQVASPP SVASGLQRVGRAGHRVGEVSRGLFYPKHRGDLLGSAVALSGMLAGSLEPLTVPANPLDVL AQQTVAACALGPIGVDAWYEALRRTAPFANLSRALFDSTLEMLAGRYPSDEFAELRPRII WDRAATADAPSGTIEGRPGAQRLAVTSGGTIPDRGLFPVYLAGSEDSKAPKRVGELDEEM VYESRAGDVIALGASSWRIEDISHDAVRVSPAPGEPSRLPFWHGERVGRPVALGRRLGQF TRELAKSAGAESGGSEDASATVAIRAELTRLGLDPWASDNLLAYIREQREATGVVPTDTR FVVERCRDELGDWRVILHSPYGYPVHAPWALAVGARVQERYGIDASALAADDGIVLRIPA VEDTPPGAELFLFEPDELEEIVKDRVGESALFASRFRESAARALLLPRRDPGRRTPLWQQ RQRSAQLLDVARKYPEFPILLETARECLQDVYDVPALLQLHRDIAARRISLSQVQTEGPS PFARTMLFEYVAEHIYDTDAPAAERRAAALALDPALLAELLGTAQLRDLLDPQVILEVQE RLQRTGAKYRARGVEGVADLLRQLGPLTARELALRLRGNEGSGVESAPEVSQSTPKDSES RSNKADISHETGDSAENADEGLPEEDLETTPHATAEEARTLAEELVESRRAFVINPRSNT ADNVEPIYAVVEDAARLRDGLGLPLPVGIAQAYLTPVAAPLEDLISRYARTHIPFTAAEA SAHFSRITPTGSGAILPVLRALETQNRLFSGEYLPEELRVPRAEAADTIPLSPAPTASLE WVDAEVLRLLRARSLAALRREIEPVPQRAYGAFLPAWQGVRTQTVKVSRRLAETTEYGAY YEPERTVQVLTESKNSSAEALEGREGLLTVIDQLAGVRMPASALETLVLPARVRDYSPQL LDSLLASGEVLWRGEGEISGNDGWVSLHLAESAELTLPGSSRTQALDELGPVEHAVFEAL SGGGLFFMPLRERVHEILASRAASGEVVHFPEASEVSAALWRLVWAGLVTNDTFAPVRAM LAGGSSAHPVRPAAPLARPVRRRGAARLSAARTSAGAYPRRYSGLGGARAGSSNPQVSAR DSGRFSHISLPQSRPHAAGTESPQEADATVTAYARAELLLDRYGVLTRGALASEDVPGGF AALYRVYAAAEERALVRRGYFIEGLGAAQFASPATVDAVRSYANIGADNPQNTGVKRIKN EEVFGLFEGVLLAATDPANPYGAALTWPSVPSLLSASSAPGGTEETEREGTETAQSVRHR PGRKAGACLILLDGEAVLYLERGGKTLLSFTAEPLKLEAAAPLLARIVQAGIAEKIVVEK LNDCDILATPEPPTHRGASKADSNRLPEHPVVALRRALLAQGFYTTPRGLRMRRSP NT seq 5751 nt NT seq  +upstreamnt  +downstreamnt atgatgtacgtaatgtacatattcaattattatggccccattacacggaaaagtcttgtg ttcgcgcacaattgcccctgtaatatgtgccacgctcaaaaaactttcaaggagaatccg gggcacatacgagataatgggaccatgcccgacgctctagaacctttctcacccgccact cagcaatggttccgcaacgcttttggcactccgaccgccgcgcaggaaggcgcctgggag agtatcagcaagggcgaaaacgcgcttattatcgcccccacgggctccggtaaaaccctt gccgctttcctgtgggcgctcgatgcgctctaccgcgacaaaagcacagaaccggatcag cgcgagcttacaatatcggctcaggggcggaaaaacggggacgctggggaaacacgaaag actcagaaacagcgcgcgggcggtacgcgcatcctgtatgtttcgcccctgaaagcactt ggggcggatgtggagcgcaacctgcgcgcgccgcttgcggggattgcgcatacggcgaag gaatccgggcaaaccccacccgatattaccgtgggtattcgaagcggtgacaccccggcg cgcgagaggcggcagcttatcagcaacccgcccgatattctgctgaccacccccgaatcg ctctaccttatgctgacctctgcggcacgttcgacactcaccggcgtgacaactgtaatt gtggacgaagtgcacgccctagcgggaaccaagcgcggggcgcatctggcggtgtccctg gagaggcttgaccagctggtggagcgaccggtgcagcgcattgggctgtcggcaaccgtg aacccacccgaagccgtcgccacatttttaggcggggttcacccggtaacgatcgtggcg cggcaggtgcccaaacgttgggatctgcggctctcggtgcccgtgccggatatggcggcg ctcggcggggcaaacgattacggacagggcagctatgcccccgaggagcagcgggcaccg cgcggacaggactcgcccagtccagccccggacgccccggatttgcaggttcaggcagcc gatgatgcgccactctatactcttgcggatgctatcggcaccttccccggcgaagaagga ttatctcttgagctgccgaacagctctgccgaacaagatggtgctgcgagcgcaacggcg agtgcaggggcacggaagccagacagtgagggcgagcgcgcatccgggtatcgtgcctcg atttggccttatgttcaggaacgcatcgtggacgatatcgagaataatcgttctacgatc gtgttcgtgaactcgcgtgggcttgccgaaaaacttaccgcggctctcaacgatattcat gtgcgccgcgagctctcacggcgcgagcttgcgggtgagcctctgcctgatattggtgag gagccagacattgcgccactggcacgggcgcatcacggttcggtggcgaaggatcagcgc acgcttatcgaagagtccctcaagaatggttcgctgcggtgtgtggtcgccacaagttca ctggagctcggcatcgatatggggcatgttgatgcggttattcaggtggcgtccccgccg tcggtggcttccggtctgcagcgggtgggccgtgccgggcaccgcgtgggcgaggtttcg cgtgggcttttttacccgaagcatcgcggggatttgttgggctctgccgtggctctctcc ggtatgctcgccgggtctttagaaccgcttaccgttcccgcgaacccgctggatgtgctt gctcagcagaccgtcgccgcctgcgctctgggacctatcggggtggatgcctggtacgag gcgctgcgccgcaccgctcctttcgcgaacctttcgcgcgcgctctttgacagtacttta gagatgctggcgggcaggtacccttccgatgagtttgcggagcttcgtccgcgtattatt tgggatcgcgccgccactgccgatgcgccaagcggcacgattgaggggcggcccggtgcg cagcggcttgcagtgacttcgggcgggacgattcccgatcgtgggctttttcctgtctac ctggccggttctgaggattccaaggcacctaaacgggtgggcgaactggacgaggagatg gtctacgaatcgcgggcgggcgatgttatcgccttgggcgcgagcagttggcgcatcgag gacatctcgcacgatgcggtgcgcgtaagccccgcgcccggtgagccttcacgtctgccg ttttggcatggtgagcgggtgggtcgcccggtagcgttgggccgtcgtctggggcagttt acccgcgagttagcgaagtctgcgggcgctgagtccggcgggagcgaagacgcctcagcg acggttgcgatacgagccgagctgacccggttagggctggatccttgggcgagcgataat ctgctcgcttatattcgggaacagcgcgaggctaccggtgtggtccccaccgatacgcgg tttgtggtggagcgttgccgcgatgaactgggagattggcgtgttattttgcattcgccg tacgggtatccggtgcacgcaccttgggctttggcggtgggcgcccgcgtgcaggaacgg tacggtatcgacgccagcgcgcttgcggcggatgatggtattgtgctgcgtattcctgcg gtggaagataccccgccgggtgccgagctttttctcttcgagcccgatgagctagaggag attgtcaaggatcgtgtgggtgaatcggcgctttttgcgtctcgttttcgagagagcgcc gcccgtgccctgcttctgccgcgccgcgatccgggcaggcgcactcccctatggcagcag cgccagcgttcggcgcagctactggatgttgcgcgcaaataccccgagttcccaattctg ctggaaaccgcccgcgaatgcttgcaggatgtatatgatgttcctgcgcttcttcagctg catcgggatattgccgcgcggcgcatcagcctgtcacaggtgcagaccgaggggccttct ccttttgcccgcaccatgcttttcgagtacgtggcggaacatatttacgatacggatgcg cccgccgccgaacgccgcgctgccgccttggcactagatccggcacttttggcggagctg ctgggtaccgctcagctgcgcgatctgctggatccgcaggtgattcttgaggttcaggag cgtcttcagcgcaccggggcgaagtatcgggcacgcggggttgagggcgtggcggatctt ctgcgccagctcggtccgctcacggcaagggagctggcgctgcggctgcgcgggaatgag gggtccggggttgagtccgcgcccgaggtctctcagagcactccaaaagacagcgaaagt cgatctaataaggctgatatttcacatgagactggggattcagccgaaaatgccgacgag ggtctgccggaagaagaccttgaaactaccccgcacgccaccgccgaagaggcgcgcacg cttgccgaagagctggtcgaatcccgcagagcgttcgttatcaatccgcgctcaaatacg gcggacaacgtggaaccgatctatgccgtcgtagaagacgccgcccggctgcgcgacggg ctagggctgccgcttccggtcggaattgctcaggcatacctcacgccggtcgccgcgccg cttgaagacctaatctcgcggtatgcgcgcacgcacatcccctttaccgcagccgaggcg agcgcccacttcagccgcatcacgccgacgggttcgggtgctattctgccggttttacgc gctttagagacgcaaaatcggctgttctcgggcgaatacctgcccgaggaactgcgtgta cctcgcgcggaggcagccgatacgataccgctctcccccgcgcccacggcaagcctggaa tgggtggatgccgaggtgcttcgcctgcttcgtgcccggtctttggcggcgctgcgccgc gagattgagccggtaccgcagcgtgcctatggcgcgttcctgcccgcctggcagggagtg cgcacgcagacggtcaaggtttcacgcaggctcgcggaaaccaccgaatacggtgcgtat tacgagcccgaacgcacggttcaggttctcaccgagagcaaaaattcatccgccgaggca ttagagggtcgcgaaggcttactgacggtcatcgatcagctggccggggtgcgtatgccc gcctccgctttggagaccctcgtcttgccagcacgggtgcgtgattattcgccgcagctc ttagatagtctgttggccagcggagaggtgctttggcgcggtgagggcgaaatctccggc aatgacggctgggtgagcctgcatcttgccgaatccgccgaactgaccctgcccggttct tcccgcacgcaggccttggatgagctgggtccggtggagcacgctgtctttgaggcgctt tccggcggcgggctgttctttatgccgcttcgtgagcgcgtgcacgaaatcttggcctct cgcgcagcctcgggcgaggttgtgcattttccggaggcttcggaggtatccgccgcgcta tggcgtctggtgtgggctgggttggtcacgaacgatactttcgccccggtacgtgccatg ctggcgggcgggtcgagcgcgcatccggtgcggcccgccgctcccctggcgcgcccggtg cgcaggcgcggtgccgcacgactgtcggcggcgcgtacttctgcgggtgcttatccgcgc aggtatagcggcttgggcggcgcccgtgccggctcttctaacccgcaggtttcggcccgg gattccgggcggttcagtcatattagccttccccagagccgtcctcatgctgcgggcacc gagtccccacaagaggcagatgccaccgttaccgcctatgcgcgcgcggaacttctctta gacaggtacggtgtgctcacgcgcggcgcgctcgcctctgaggatgttcccggcggcttt gcggccctgtaccgcgtctatgcggctgcagaggaacgtgccctggtgcggcgcggatac tttatcgaggggctgggtgcggctcagtttgcctccccggcaacggtggatgcggtgcgt tcctacgctaatattggcgctgataatccgcagaataccggagtaaaacgaataaaaaac gaggaagtattcggtttatttgagggtgttctgctggcggctacagatccggcgaatccc tatggtgcggcactcacatggccttccgtgcccagcttactctcggcctcttctgcaccc ggcggtacggaagaaaccgagcgcgaaggcacagagaccgcccagtccgtgcggcatcgt ccggggcgtaaggcgggtgcctgcctcatcctgctcgatggtgaagcggtcctctatctg gaacgcggcggcaaaaccctgctgtctttcacggctgaaccgctcaaacttgaggctgcg gcaccgctgctggcgcgcatcgtgcaggcgggtatcgctgagaagatcgtggtggaaaaa ctcaacgattgtgatattctggcgaccccggaaccgccgactcatcggggagcctccaag gccgattctaaccggctgcctgagcatccggtggtggcgttacggcgcgcactgcttgcg cagggcttttacacaaccccgcgcggtctacggatgcgccgctccccctaa

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