Rothia dentocariosa: HMPREF0733_11350
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Entry
HMPREF0733_11350 CDS
T01343
Symbol
glyA
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn00260
Glycine, serine and threonine metabolism
rdn00460
Cyanoamino acid metabolism
rdn00630
Glyoxylate and dicarboxylate metabolism
rdn00670
One carbon pool by folate
rdn00680
Methane metabolism
rdn01100
Metabolic pathways
rdn01110
Biosynthesis of secondary metabolites
rdn01120
Microbial metabolism in diverse environments
rdn01200
Carbon metabolism
rdn01230
Biosynthesis of amino acids
rdn01240
Biosynthesis of cofactors
rdn04981
Folate transport and metabolism
Module
rdn_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HMPREF0733_11350 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HMPREF0733_11350 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HMPREF0733_11350 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HMPREF0733_11350 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HMPREF0733_11350 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HMPREF0733_11350 (glyA)
Enzymes [BR:
rdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HMPREF0733_11350 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ADP40807
UniProt:
E3H5H4
LinkDB
All DBs
Position
1472544..1473851
Genome browser
AA seq
435 aa
AA seq
DB search
MQIHTLRSGMTEQTRTVLEAPLAELDPEVAEALDLERKRQQNTLEMIASENFVPRAVLQG
QGSVLTNKYAEGYPGRRYYGGCEFVDIVEELAIKRVKELFGAEHANVQPHSGAQANNAVM
HALLTPGEKIMGLSLAHGGHLSHGMKLNVSGKLYEVVAYEVGEDGRIDMEQVRQLALAER
PKVIIAGWSAYPRQLDFAKFREIADEVGAYLWVDMAHFAGLVAAGLHPNPVPHAHVVSST
VHKTLGGPRSGFILCTEELKKKIDSAVFPGQQGGPLMHVIAAKATAFKVAATEEFKDRQK
RTIEGARILAERLTHQDMRDAGVSIATDGTDVHLVLVDLRHHELTGKEAEDLLHDAGITV
NRNAVPNDPRPPMVTSGLRIGTSALATRGFDAEGFTEVADIIASVLLPQHDIAALRERVN
KLCGKYPLYVGSESW
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcacactttgaggagtggtatgaccgagcagactcgaaccgtgcttgaggct
cccctcgcggagcttgaccccgaggtcgccgaagcactcgatctggaacgtaagcgccaa
caaaacaccctggaaatgatcgcctccgaaaacttcgtgccgcgtgccgtactccagggg
caggggtcagtgctgaccaataaatatgcggaaggctacccgggccgccgctactatggt
ggctgcgaattcgtcgatattgtcgaagagttggctattaaacgggtcaaggaactcttc
ggtgccgaacacgccaacgtacagcctcactccggtgcccaggcgaataacgccgtcatg
cacgccctgctgacccccggtgagaagatcatgggtctttcgctggctcacggtgggcac
ctctcgcacggtatgaagctgaacgtctcgggtaagctctacgaggttgttgcctacgag
gtaggcgaagacggtcggatcgatatggaacaggttcggcagctcgcacttgcggagcgt
cccaaggttattattgctggatggtcggcgtacccccgtcaactggatttcgcgaaattc
cgtgagattgccgatgaagttggtgcctacctgtgggttgatatggcccattttgccggt
ctggtggcggcgggtttgcaccccaatccggtgccgcacgcccacgtggtttcctcgacc
gtgcataagaccttaggtggaccccgctccgggtttatcctgtgcaccgaagagctcaag
aaaaagatcgactcggctgtattccctgggcagcagggtgggccgctcatgcacgtgatt
gccgcgaaagcgaccgcgttcaaggttgccgcgaccgaggaattcaaagaccgtcagaaa
cgcacgattgagggagcgcgcatcctggcagagcgcctaacccaccaggatatgcgcgat
gcgggtgtttccatcgccaccgatggtaccgacgttcacctggtactggtcgatctgcgc
caccacgagctcaccggtaaagaggctgaagacctgctgcacgatgcgggtattaccgtt
aaccgcaacgcggtgccgaacgatccccgcccgccgatggtgacctccgggctgcgcatc
ggtacctcggccctggcaacccgcggtttcgacgccgaaggctttaccgaggtcgccgat
attatcgcttcggtactgttgccgcagcacgatatcgccgccttgcgtgagcgcgtgaat
aagctctgcggtaagtacccgctctatgtgggaagtgagagctggtaa
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