Rothia dentocariosa: HMPREF0733_11361
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Entry
HMPREF0733_11361 CDS
T01343
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn00020
Citrate cycle (TCA cycle)
rdn00190
Oxidative phosphorylation
rdn00650
Butanoate metabolism
rdn00720
Other carbon fixation pathways
rdn01100
Metabolic pathways
rdn01110
Biosynthesis of secondary metabolites
rdn01120
Microbial metabolism in diverse environments
rdn01200
Carbon metabolism
Module
rdn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rdn_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HMPREF0733_11361 (sdhA)
00650 Butanoate metabolism
HMPREF0733_11361 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
HMPREF0733_11361 (sdhA)
00720 Other carbon fixation pathways
HMPREF0733_11361 (sdhA)
Enzymes [BR:
rdn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HMPREF0733_11361 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
Pyr_redox_2
DAO
FAD_oxidored
FAD_binding_3
GIDA
Motif
Other DBs
NCBI-ProteinID:
ADP40818
UniProt:
E3H5I5
LinkDB
All DBs
Position
1482998..1484761
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AA seq
587 aa
AA seq
DB search
MQVHKYDVVIVGAGGAGMRAAIEAGQRVRTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGRIDQRRFGGHT
RDHGKAAVRRACYAADRTGHMILQTLYQNCVRHNVEFYNEFYVLDLIMSEDENGNPRPAG
VVSYDLATGEVHVFQSKSVIFASGGCGKIFKTTSNAHTLTGDGMAIALRAGLPLEDMEFV
QFHPTGLAGLGILVTEGARGEGGILRNSEGERFMERYAPTIKDLAPRDIVARAMANEVRE
GRGCGPHKDYVLLDLTHLEPAHIDEKLPDITEFARTYLAVEPHHQPIPVFPTAHYAMGGI
PTNNDTEVYRNSEETIPGLYAAGEVACVSVHGANRLGTNSLLDINVFGKRAGRRAAEYAA
SAEFVPVPDDAADRTLAMLNGIRDGQGTEKVGAIRTELQRVMEADMQVFRTEETIRKALA
AIDELEKRYANISIQDKGKRFNLDLLEAVELGFLLQLAKVMSVGALHRQESRGGHYREDF
PKRDDVNFMKHSMVYLDPESEFEGVQGLRFDTKPVVYTRYEPKERKY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtacataagtacgatgtagtgattgttggcgctggcggcgcaggtatgcgtgcc
gctattgaggcggggcagcgcgtacgaaccgcggtgctgacgaagctataccccacccgc
tcgcacaccggtgcggcacagggcggtatgtgcgccgctttggccaacgttgaggaagac
aactgggaatggcatacctttgacaccgtcaaaggcggcgactaccttgtcgatcaggat
gcggcagagattatggcgaaagaagccattgacgccgtgctcgaccttgaaaaaatgggt
cttcccttcaaccgtacccccgaggggcgcattgatcagcgtcgttttggcgggcatacc
cgcgatcacggtaaagccgccgtgcgtcgcgcatgttacgctgccgaccgcacgggtcat
atgattctgcagaccctctaccagaactgcgtgcgtcacaatgtcgagttctacaacgag
ttctacgtgctcgacctcattatgtcagaagacgaaaacggcaacccccgacctgcaggt
gttgtctcctacgacctggcaaccggcgaagtacacgttttccaatcgaaatccgtgatt
ttcgcatctggcggatgcggcaagatcttcaagaccacctcaaacgcgcacaccctcacc
ggcgacggcatggcaatcgccctgcgcgcaggtcttcccctagaggatatggaatttgta
cagttccacccgaccggccttgcgggcctgggtattcttgtgaccgagggtgcccgtggt
gaaggcggtattctgcgtaactccgagggtgagcgtttcatggaacgatacgcaccgacc
attaaggacctagctccccgcgatatcgtggctcgtgcaatggcgaacgaggtgcgtgaa
ggtcgcggctgtggaccgcataaagactatgtgcttctagacctcactcacctagaacca
gcgcatatcgacgagaaactgccggatattaccgaattcgcgcgtacctatctggcagtt
gagccgcaccaccagcctattccggtgttccccactgcgcactatgcgatgggcggtatt
ccaacgaacaacgataccgaggtgtaccgcaacagcgaagagactattccaggactatac
gcagccggtgaggttgcctgcgtgtcggtgcacggtgcaaaccgtttaggaaccaactcg
ctgctggatattaacgtgttcggtaagcgtgctggccgccgcgccgcagaatacgccgca
tccgcagaattcgtgcccgttccggacgatgctgccgatcgcactctcgcgatgctcaac
ggtattcgtgacgggcagggcactgaaaaggttggcgctatccgcaccgagctgcagcgt
gtgatggaagccgatatgcaggttttccgtaccgaagaaaccattcgtaaggcactcgcc
gccattgacgaactcgaaaagcgctacgcaaatatctcgattcaggataaaggcaagcgc
ttcaaccttgacctgttggaggccgttgagctcggcttcctgctacagctcgccaaggtg
atgtcggtgggcgcactgcaccgccaggaatcccgaggcggtcactaccgtgaggacttc
ccgaagcgcgacgacgtgaacttcatgaagcactcgatggtttatctagatcccgagtct
gagtttgagggtgtgcagggtctgcgttttgataccaagcccgttgtctacactcgttac
gagcccaaggagcgtaagtactaa
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