Rothia dentocariosa: HMPREF0733_11436
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Entry
HMPREF0733_11436 CDS
T01343
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn00521
Streptomycin biosynthesis
rdn00523
Polyketide sugar unit biosynthesis
rdn00525
Acarbose and validamycin biosynthesis
rdn00541
Biosynthesis of various nucleotide sugars
rdn01100
Metabolic pathways
rdn01110
Biosynthesis of secondary metabolites
rdn01250
Biosynthesis of nucleotide sugars
Module
rdn_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HMPREF0733_11436 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HMPREF0733_11436 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HMPREF0733_11436 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HMPREF0733_11436 (rfbB)
00525 Acarbose and validamycin biosynthesis
HMPREF0733_11436 (rfbB)
Enzymes [BR:
rdn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HMPREF0733_11436 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
Sacchrp_dh_NADP
NAD_binding_10
adh_short
NmrA
KR
ApbA
Motif
Other DBs
NCBI-ProteinID:
ADP40893
UniProt:
E3H5W3
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All DBs
Position
1572021..1573019
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AA seq
332 aa
AA seq
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MSHLLVTGGAGFIGSNFVHYLLDNTEHTVTVLDKMTYAANKTSLNGLDGTRFNLMVGDIA
DRELTDELVAQADAVIHYAAESHNDNSLANPEPFIHTNLVGTFTLLEAVRRHGTRYHHIS
TDEVFGDLALEDPAKFTETTPYNPSSPYSSTKAGSDLLVRAWVRSFGIEATISNCSNNYG
PYQHIEKFIPRQITNILSGLTPKLYGEGLNVRDWIHASDHSSAVLRILESGKIGETYLIG
ADGEENNITVLRTILRLMGKDENDFEHVIDRPGHDMRYAIDGTRLREELGWEPQFTDFEA
GLADTIAWYTDNRSWWEPLKAEVEAKYAKAGQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttactcgttaccggcggtgccggattcattggctctaactttgttcattat
ctattggataatactgaacacactgttacagtactcgataaaatgacctatgccgccaat
aaaacctcgcttaatggtcttgacggcaccagatttaaccttatggttggcgatattgca
gaccgtgaactcactgacgagctcgtagcgcaggcagatgcagtcatccattacgccgca
gaatcccataacgataactccctggcgaacccagaaccttttattcacaccaacttagtc
ggcacgtttaccctgctggaggcggtacgcagacacggaacccgctatcaccacatctcg
accgatgaagtcttcggtgatttggcgctggaggaccccgcaaagttcaccgaaactacg
ccctataacccgtcatccccgtattcttccaccaaggcaggttcggatctgctggtgcgc
gcctgggtgcgttctttcgggattgaggcgaccatctcgaactgctcgaataactacggg
ccgtatcagcacatcgaaaaatttattccccggcagattacgaatatcctctcggggctg
acccctaagctctacggcgagggcctgaacgtgcgcgactggattcacgcatccgatcat
tcttcggcggtgctgcgcatccttgaatccgggaaaattggcgagacctacctcatcggt
gcagacggcgaggagaataacattaccgtgctgcgtactattcttcgcctcatgggtaaa
gacgagaacgactttgaacatgtgatagaccgtcccgggcacgatatgcggtatgccatt
gacggcacccgtctgcgcgaagaactcgggtgggaaccgcagttcaccgactttgaggcg
ggtcttgccgataccatcgcgtggtataccgataaccgttcctggtgggaaccgctcaaa
gcagaagttgaggctaaatacgcgaaggcggggcagtaa
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