KEGG   Rothia dentocariosa: HMPREF0733_11436
Entry
HMPREF0733_11436  CDS       T01343                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
rdn  Rothia dentocariosa
Pathway
rdn00521  Streptomycin biosynthesis
rdn00523  Polyketide sugar unit biosynthesis
rdn00525  Acarbose and validamycin biosynthesis
rdn00541  Biosynthesis of various nucleotide sugars
rdn01100  Metabolic pathways
rdn01110  Biosynthesis of secondary metabolites
rdn01250  Biosynthesis of nucleotide sugars
Module
rdn_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:rdn00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    HMPREF0733_11436 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    HMPREF0733_11436 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    HMPREF0733_11436 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    HMPREF0733_11436 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    HMPREF0733_11436 (rfbB)
Enzymes [BR:rdn01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     HMPREF0733_11436 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_4 Sacchrp_dh_NADP NAD_binding_10 adh_short NmrA KR ApbA
Other DBs
NCBI-ProteinID: ADP40893
UniProt: E3H5W3
LinkDB
Position
1572021..1573019
AA seq 332 aa
MSHLLVTGGAGFIGSNFVHYLLDNTEHTVTVLDKMTYAANKTSLNGLDGTRFNLMVGDIA
DRELTDELVAQADAVIHYAAESHNDNSLANPEPFIHTNLVGTFTLLEAVRRHGTRYHHIS
TDEVFGDLALEDPAKFTETTPYNPSSPYSSTKAGSDLLVRAWVRSFGIEATISNCSNNYG
PYQHIEKFIPRQITNILSGLTPKLYGEGLNVRDWIHASDHSSAVLRILESGKIGETYLIG
ADGEENNITVLRTILRLMGKDENDFEHVIDRPGHDMRYAIDGTRLREELGWEPQFTDFEA
GLADTIAWYTDNRSWWEPLKAEVEAKYAKAGQ
NT seq 999 nt   +upstreamnt  +downstreamnt
atgtctcacttactcgttaccggcggtgccggattcattggctctaactttgttcattat
ctattggataatactgaacacactgttacagtactcgataaaatgacctatgccgccaat
aaaacctcgcttaatggtcttgacggcaccagatttaaccttatggttggcgatattgca
gaccgtgaactcactgacgagctcgtagcgcaggcagatgcagtcatccattacgccgca
gaatcccataacgataactccctggcgaacccagaaccttttattcacaccaacttagtc
ggcacgtttaccctgctggaggcggtacgcagacacggaacccgctatcaccacatctcg
accgatgaagtcttcggtgatttggcgctggaggaccccgcaaagttcaccgaaactacg
ccctataacccgtcatccccgtattcttccaccaaggcaggttcggatctgctggtgcgc
gcctgggtgcgttctttcgggattgaggcgaccatctcgaactgctcgaataactacggg
ccgtatcagcacatcgaaaaatttattccccggcagattacgaatatcctctcggggctg
acccctaagctctacggcgagggcctgaacgtgcgcgactggattcacgcatccgatcat
tcttcggcggtgctgcgcatccttgaatccgggaaaattggcgagacctacctcatcggt
gcagacggcgaggagaataacattaccgtgctgcgtactattcttcgcctcatgggtaaa
gacgagaacgactttgaacatgtgatagaccgtcccgggcacgatatgcggtatgccatt
gacggcacccgtctgcgcgaagaactcgggtgggaaccgcagttcaccgactttgaggcg
ggtcttgccgataccatcgcgtggtataccgataaccgttcctggtgggaaccgctcaaa
gcagaagttgaggctaaatacgcgaaggcggggcagtaa

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