Rothia dentocariosa: HMPREF0733_11550
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Entry
HMPREF0733_11550 CDS
T01343
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rdn
Rothia dentocariosa
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rdn03016
]
HMPREF0733_11550 (truB)
Enzymes [BR:
rdn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HMPREF0733_11550 (truB)
Transfer RNA biogenesis [BR:
rdn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMPREF0733_11550 (truB)
Prokaryotic type
HMPREF0733_11550 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADP41007
UniProt:
E3H0B3
LinkDB
All DBs
Position
1705389..1706471
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AA seq
360 aa
AA seq
DB search
MAKARERGPSGLLVVNKPAGMTSHDVVSKIRWIAGTRRVGHAGTLDPAATGVLVLGLNKA
TKLLTYLVGQDKTYEARLVLGAATLTEDAEGELTGIARAEAVRALTREKIENAVRSLTGN
IMQVPSAVSAIKVKGVRSYARVRDGEDIELAARKVTIHEAAVHEVRDSELDTRLYTVAEG
LDIPACVPVVEVDITVSCSSGTYIRAFARDVGKALGVGGHLSALNRIRVGNVYQREALDL
AELMKERENADGPLDLPVLSLEEAARRLFNVRQLSTQEATDISFGRCITAGEEGSDVFAL
GTQSPESQHASTEGITAAFAPDGTLVALIENVKFRGTRCAAPVLVFEAGIDFSREAGERL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagctcgggagcgtggaccgtcaggtttgctggtggtgaataaacctgctggc
atgacgagccatgatgtagtctcgaagatccgctggattgccggtacgcggcgtgttggt
catgcaggtactcttgatccggcggcgaccggtgtgttggttttgggcttgaataaagcg
acaaagcttttgacgtatttagttggtcaggataaaacttatgaggctcgcctggtgtta
ggggccgcaactctgacagaggacgctgagggagagctcaccgggattgctcgcgcggag
gctgtgagggctctgactcgggagaagattgaaaacgctgtacgatctttgacgggtaat
attatgcaggttccctccgccgtttcggcgattaaggttaagggtgtgcgttcttatgct
cgggttcgtgacggcgaggatattgaacttgccgcccgaaaggtcacgattcatgaggcc
gctgttcatgaggtgcgcgatagcgaacttgatactcgactatatactgttgccgagggg
cttgatattcctgcgtgtgtaccagttgttgaggtagatattacggtttcctgctcttct
ggaacctatattcgtgcttttgctcgtgatgtgggtaaagccctgggcgttgggggccat
ttgagtgctttgaaccgtattcgtgtagggaatgtgtatcagcgtgaggcgcttgattta
gctgaactcatgaaggagcgcgagaacgctgatgggccgctagacttacccgtactttct
cttgaggaggcggcacggcgtctgttcaacgttcggcagctttcgacgcaagaggcgacc
gatatttcatttggtcggtgcattacagccggtgaggagggctcagatgtttttgcttta
ggtacacaaagcccggagtctcagcatgccagtaccgaggggataactgccgcatttgcg
ccggacggaacactggtggctcttatagagaatgtgaagtttcggggaacccgatgtgcg
gcgcccgtgctcgtatttgaagcaggaattgacttctcgcgggaagcgggggagcggtta
tga
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