Rothia dentocariosa: HMPREF0733_11585
Help
Entry
HMPREF0733_11585 CDS
T01343
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn00300
Lysine biosynthesis
rdn00470
D-Amino acid metabolism
rdn01100
Metabolic pathways
rdn01110
Biosynthesis of secondary metabolites
rdn01120
Microbial metabolism in diverse environments
rdn01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HMPREF0733_11585 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF0733_11585 (dapF)
Enzymes [BR:
rdn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HMPREF0733_11585 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ADP41042
UniProt:
E3H0E8
LinkDB
All DBs
Position
1743356..1744294
Genome browser
AA seq
312 aa
AA seq
DB search
MTDGVSTWGELAGRTLTKGHGTGNDFIFLTDPASEIPLDADLIARVCDRHFGIGADGFIR
AAYTENFRTGQNMLEEHPDAIWFMDYRNGDGSIAEMCGNGVRAFVDYLRTEGMIDLEVGE
TVKIATRGGVKIVARTEEGYAIDMGPWSFIHGDTARESGEDSHVSARGLMTPRAGLSISM
GNPHTVVMLGQEGKLDGLDLNSQPQVNPAPEKGTNVEFVVPVDLETSDENKNVGAIRMRV
YERGVGETLSCGTGACAAAAATRFWGGEEAPDEWLVHVPGGTLAVTFVLGPDDLEHVVLA
GPAQTVAKIELH
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatggcgtatccacgtggggagaactagccgggcgtactctgacaaaggggcat
ggaacgggtaatgactttatatttctgaccgacccagcctctgagatcccgctcgatgct
gacctcatcgcgcgtgtctgcgatcgtcattttggaatcggtgctgacggctttatccgt
gcagcgtataccgaaaatttcaggaccgggcagaatatgctggaagaacatccagacgct
atctggtttatggattaccgtaatggtgacggctcgatcgccgaaatgtgcgggaatggt
gtgcgtgccttcgtcgattacttgcgtactgagggaatgattgaccttgaggtaggtgag
accgtcaagattgctacgcgaggtggcgtcaaaatcgtggcgcgcaccgaagaaggatat
gccattgatatgggtccgtggagttttatccacggagacacagcacgcgaaagtggtgaa
gattcgcatgtttcggcgcgtggactgatgactccccgagccggtctgtcgatttcgatg
ggtaacccccacactgtggtgatgctgggtcaggaaggcaagttggacggactcgatctg
aacagccaaccacaggtaaatccagcccccgaaaaaggaactaacgttgagtttgtggtt
ccggttgatctagaaacatccgacgagaataaaaatgttggagccatcaggatgcgcgta
tacgaacgcggcgtaggtgagactctatcctgcgggactggtgcatgcgcggccgcggcg
gcaacccgtttttggggcggcgaagaggcgcccgatgaatggctggttcatgttcccggc
ggcacgctcgcagtaaccttcgtcctaggccccgacgacctcgaacacgtcgttctagca
gggccagctcagacggttgccaagattgagctccactaa
DBGET
integrated database retrieval system