Rothia dentocariosa: HMPREF0733_11621
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Entry
HMPREF0733_11621 CDS
T01343
Symbol
recN
Name
(GenBank) DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
rdn
Rothia dentocariosa
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdn03400
]
HMPREF0733_11621 (recN)
DNA repair and recombination proteins [BR:
rdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HMPREF0733_11621 (recN)
TLS (translesion DNA synthesis) factors
Other SOS response factors
HMPREF0733_11621 (recN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_22
AAA_21
AAA_15
ABC_tran
OmpH
GAIN
DAO_C
DHQ_synthase
HET-S
AAA_29
TsaE
Motif
Other DBs
NCBI-ProteinID:
ADP41078
UniProt:
E3H0R1
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All DBs
Position
1787296..1789005
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AA seq
569 aa
AA seq
DB search
MIEEIHIRDLGIITDARLPLQPGLSVLTGETGAGKTMVVTALGMLLGARSDAASVRQGAK
SALAEAIVRLPQEHKALTLAEEVGGTVDPVDEKTSELLLARTVNASGRSRAHVGGCTAPV
GKLSDIGQTLVAVHGQSDQLRLKSASEQRRALDLYAGEKLFDLLEKYQHTYERYRVAAAE
YKEVRENSRARALEAQSLQGALEEIDSVNPQMGEDEALKNESIKLMNVEALRTATGVAAA
ALSGSEYTEGTEANVLSLLDAAHTSLLGQADADSDIENLAQRVNELLVLATDIATDISTY
STSLDSEGPERLAQVQERRAQLKTLTRKYGADIAEVLEWAEESRDRLTHLVDDPERQESL
EQELTDLRQALGEQATQLMKARQEAASRLADSVSEELTALAMPNASLVVEVAEADKFSIH
GRDTVTFMLAPHREATPRPLGKGVSGGELSRVMLALEVVLAEVDPVPTFIFDEVDSGVGG
KAAIEIGRRLAMLAQHVQVLVVTHLPQVAAFADQHILVLKNDDASLSKVQVLSDQERVVE
LARMLAGHDQSEAAQEHARELLRAGDQLE
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaagaaatccatattcgggacttgggcattattactgatgctcgattacccttg
cagcccgggctgtcggttctaacaggtgaaactggtgccggtaaaactatggtcgttacg
gcgcttggtatgcttcttggggcacgtagtgatgctgcaagtgtgcgtcaaggggcaaag
agcgccttagcggaagccattgtgcgcctacctcaagaacataaggctttgaccctcgcg
gaagaagtgggcggaacagttgacccggtagatgaaaaaacaagcgaacttctcttagct
cgcaccgttaatgcttctgggcgttctcgagcacatgtaggaggatgcaccgcgcctgtc
ggtaagctttcagatattgggcaaactcttgtagctgtgcacggtcagtcggatcaattg
cgtctcaagtctgccagcgagcaacgtcgtgcactagacctttatgcgggcgaaaagctt
tttgacctgttggagaagtaccagcatacctatgagcggtaccgagtcgcagccgctgaa
tataaagaggttcgtgagaattctcgtgcacgagcattagaggcgcaaagcttgcagggg
gcgcttgaagaaatagactccgtaaacccacagatgggcgaggacgaagcgcttaagaat
gaaagcatcaaactgatgaatgttgaggcgcttcgtaccgcaaccggtgttgcagcggcg
gcgctgtcgggcagcgaatatacggaaggtacagaggcaaatgtactgagtcttctggat
gcggcacatacatctcttttgggacaagccgatgctgatagcgatatagagaatttagct
caacgggttaacgaacttttagttctggcgactgatattgccaccgatatttctacctat
tcgacctcgttagattctgaagggcctgaacgcctagcgcaggtacaggagcgtcgtgcg
cagctgaaaactttgacgcgaaaatatggtgcagatattgcggaagtccttgagtgggcc
gaagaatctcgtgatcgcctgactcaccttgttgatgatccagagcgacaggaatctctg
gaacaagagctcaccgacctgcgtcaggctttaggagagcaggcaactcagcttatgaaa
gcgcgtcaagaagccgcttcgcgtttagcggattctgttagtgaagaactaaccgcgctt
gccatgccgaatgcttctcttgttgttgaagttgccgaggcagataaattttcaattcat
ggtcgtgacacagtgacctttatgcttgctccgcatcgtgaggcaacccctcgtccactt
gggaaaggcgtctctggaggtgagctttcgcgcgtaatgcttgcgttggaggttgtgttg
gcggaagtggatccggtacctacctttatctttgacgaagtagattcgggcgttggcggt
aaggctgctattgagattggtcgcaggcttgcaatgcttgcccagcatgtacaagttttg
gtggtaactcacctaccacaggttgcggctttcgcggatcagcatattctggtccttaaa
aatgatgacgcatcgttatcgaaagtacaggtgctttctgaccaagagcgtgttgtggaa
ctcgctcgtatgctcgccggacacgatcagtcggaagcagcccaagaacacgcgcgagag
cttttacgcgcaggggaccagcttgagtaa
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