Rothia dentocariosa: HMPREF0733_11629
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Entry
HMPREF0733_11629 CDS
T01343
Name
(GenBank) pseudouridylate synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rdn
Rothia dentocariosa
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rdn03009
]
HMPREF0733_11629
Enzymes [BR:
rdn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HMPREF0733_11629
Ribosome biogenesis [BR:
rdn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HMPREF0733_11629
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
PDZ_Tricorn
Motif
Other DBs
NCBI-ProteinID:
ADP41086
UniProt:
E3H0R9
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All DBs
Position
1798056..1799129
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AA seq
357 aa
AA seq
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MTYGNSRGKNPESRKPRPGAKRNGVGASSSTRGGKFSGKTSGGGKSKAGTSGSPRAARSH
GAGASKRDRRAPHRPYRSGEAFPHERGEYRVNNYSGPHRPRRPRNAPVDHFDFYDHEGVR
LQKLMAQAGVASRRVCEEMITEGRVTVNGEVVTELGVRVNPADVIVQVDGMTVQTNEKLI
YMAFNKPAGVVSTMEDPDGRPCIKDFLRDSMNERVFHVGRLDVETEGLLLLTNDGELANR
LTHPSYEVPKTYLVQVRGPVESGIGAELKKGIRLEDGVSRVDSFKLVDSAPGHVLIEVTI
HSGKNRIVRRLFEAVGYPVEKLVRVQMGPIRIGSQKQGTVRNLSKVEIGHLLASVEM
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgacatatggaaactctcgcggtaaaaaccccgagtcgcggaaacctcgacccggcgcg
aaacgtaatggcgtgggcgctagctcctcaacccgaggcggtaaatttagcggcaaaact
tcaggcggtggaaagtctaaagccggtacatcagggtctccacgcgccgcgcgtagccac
ggtgcgggtgcttccaagcgggataggcgggcgccgcatcgcccctatcgttccggtgaa
gctttcccgcatgagcgcggcgaatacagggtaaataactactctgggccacatcgccca
cgccgtccccgtaatgcgcctgtggatcattttgatttctatgatcacgaaggtgtacgc
ctgcaaaaattgatggcgcaggcaggtgttgcatcgcgtcgtgtatgtgaagagatgatc
acggaaggacgagtgaccgttaacggtgaggtcgtgaccgagctgggggtgcgtgttaat
cctgccgatgtgattgtgcaggttgatggtatgaccgtgcagactaacgaaaagctcatc
tacatggcgttcaataaacctgctggcgtcgtttccacgatggaagaccccgatggccgc
ccctgcattaaagattttctacgtgactctatgaatgagcgcgttttccatgtgggacga
ttagacgtggaaaccgagggtctgctgcttcttactaacgacggcgagctcgcaaaccgt
ttaacacatccttcgtatgaggtacccaaaacgtatctggtgcaggtgcgcggtccagta
gaatcaggtattggcgctgagctaaagaaaggtattcgccttgaagacggcgtatcgagg
gtggactcctttaaacttgtggattcggcacccggccatgtgctgattgaagtgaccatt
cactcgggcaagaaccgtattgtgcgccgcctctttgaagccgtggggtatcctgtggag
aaacttgttcgtgtgcagatgggtcccattcgtatcggatcgcagaagcaggggactgtt
cgtaatctttctaaagtcgaaattgggcatctgcttgcttcggtggagatgtaa
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