Rothia dentocariosa: HMPREF0733_11669
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Entry
HMPREF0733_11669 CDS
T01343
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn00470
D-Amino acid metabolism
rdn00550
Peptidoglycan biosynthesis
rdn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF0733_11669 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF0733_11669 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rdn01011
]
HMPREF0733_11669 (murD)
Enzymes [BR:
rdn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HMPREF0733_11669 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rdn01011
]
Precursor biosynthesis
Amino acid ligase
HMPREF0733_11669 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
3HCDH_N
2-Hacid_dh_C
NAD_binding_7
TrkA_N
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ADP41126
UniProt:
E3H0V9
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Position
1848070..1849671
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AA seq
533 aa
AA seq
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MPDAKNSQRASKYQAQRAQYADAIAVNPVVNNPRLAELTTWDGPWAGLKVVVIGLGTSGD
AAVDVLAQKGAHITAIDAQDTQEKRERIRIYQEAYGNVAGLFGEEYMECVPRVDDQDPDV
IVTSPGIRPDSLVMLDAYERGIQIWSEIELAWRLNQRQGRVTPKWLCLTGTNGKTTTVGM
VDSILKAAGKKSLQVGNVGMPAVYAVADDEPYEFFAVELSSFQLHWTSSLSPYASVVLNV
AEDHVDWHGSFEAYKADKARVYENTQAACIFNTDHADTLRMVEEADVIEGARAIGISSTE
IPSVSMLGLAENIIVDRAFLKNRYSEALELGVLEDLAPVPGQAPAQHTVENALAAAALCR
AANIAPEAVRDGLRSYKPGAHRNQTVLYRDGIQWVNDSKATNPHAANASMSAYPSLIWIA
GGLSKGVEYDDLIAQHASRLKAVLIIGTDTAGLKTSLAKYASHVPTYNMTASANDPSDGV
TVMEAAVVKAEELAAEGDTVLMAPAAASMDQFNNYAVRGNAFVDAVKSHIVGI
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacgctaagaactcgcagcgggcctccaagtatcaggcacagcgtgcccaatat
gcagatgctatcgctgtcaatccagtcgtcaataatcctcggcttgctgagctcactacc
tgggacgggccttgggcggggctgaaggttgtcgtgataggcctcggcaccagcggcgat
gctgcagtggatgtgctggcccagaaaggtgcccacattaccgctattgatgcgcaggat
acgcaagaaaagcgagagcgcatccgaatttaccaagaggcctatggaaacgtggcgggt
ttatttggtgaggaatacatggaatgtgtgcctcgtgtcgatgatcaagacccggatgtt
atcgtgacttcgccaggaattcgtccagatagcctggtcatgctcgatgcttatgaacgg
ggtatccaaatttggagtgaaatcgaactggcatggcgtctgaatcaacgtcaaggtcgg
gttactccaaagtggctgtgcctgacgggaaccaatgggaaaactacgaccgtgggcatg
gtcgattcgattcttaaagcagccggtaaaaaatctctgcaggttgggaacgtgggcatg
ccagcagtctacgctgttgccgacgatgaaccctatgaattttttgcggtagagctttcg
agctttcagctgcattggacttcttcactatcgccatacgcttccgtggtgcttaacgta
gcggaagatcacgtcgattggcacggttcctttgaggcttacaaggccgataaagcacgt
gtgtacgaaaatactcaggcagcgtgtattttcaataccgatcatgctgatactttgcgt
atggtcgaagaagcagacgttatagaaggtgcccgtgccatcggtattagctcaaccgag
atcccctcagtctccatgttgggcttggcggaaaacattattgttgaccgtgcgtttttg
aagaatcgatacagcgaggcacttgagcttggtgttcttgaagatttagcgcccgttccc
ggtcaagctcccgcacagcacaccgtggagaatgcgctagccgctgccgcattatgtcgt
gctgcaaatattgctcctgaggctgtgcgggatggactgcgttcttataagcctggtgcg
catcgtaatcagacggtgctttaccgcgatggaatccagtgggtcaacgattctaaggct
actaacccacacgccgctaacgcttcaatgagcgcttatccttcgctgatttggattgct
ggaggtctttctaaaggggtggagtatgatgatcttatagctcagcatgcttcacgtttg
aaagcagtattaatcattggcactgatacggcgggacttaaaacatctttggcgaagtat
gcaagccatgttcctacctataatatgacggcttcggcgaatgatccctctgacggggtt
actgttatggaagctgccgtagtcaaagcagaagagctagccgctgagggtgatacagta
ctcatggcgcctgccgctgcttcgatggatcaatttaacaattatgccgttcgtggtaac
gcttttgtggatgcggtcaaatctcatattgtcggtatctga
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