Rothia dentocariosa: HMPREF0733_11705
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Entry
HMPREF0733_11705 CDS
T01343
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn00300
Lysine biosynthesis
rdn00470
D-Amino acid metabolism
rdn01100
Metabolic pathways
rdn01110
Biosynthesis of secondary metabolites
rdn01120
Microbial metabolism in diverse environments
rdn01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HMPREF0733_11705 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF0733_11705 (lysA)
Enzymes [BR:
rdn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HMPREF0733_11705 (lysA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
DUF2093
Motif
Other DBs
NCBI-ProteinID:
ADP41162
UniProt:
E3H174
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All DBs
Position
1892069..1893583
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AA seq
504 aa
AA seq
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MSDAQSLYAPDWLTCPEHPAELNRTIWTDSFQRNHGGELTIDGIAASELVKEFDTPQYVF
SEDTFRARARGYRQAFKDAFARYGAQVSVYYAGKSFLCTSVARWAHEEGLCLDTASGGEL
AIALRAQVPGQNIALHGNNKSHGEIVRAIKHGVGRVVADSVDELKLIADVHAELNAERAA
AGQEPYPAVPVLIRITPGVHASTHESIATAHEDQKFGMSLQPGTARLAGLEADELEYWST
TEDESYAMLAAGILTATDSLEFRGIHCHIGSQIFEAQGFEQAADTALTFMHAVNQKYGLS
LPELDLGGGYGIGYTEADTPRSIEQITVSIADAVAATCVRLGLAIPHMSFEPGRSISGPS
GVTLYTVGTIKNVSIEDEHGQIRVRRYVSVDGGMSDNARPVLYDADYAVTLANRAPAGEH
VLSRVVGKHCESGDIVVRYCYLPADLRAGDILAVPATGAYCYVLGSNYNYLSRPPVIATS
AGEAAHPIIRRQSEDEMLALDTGF
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcacaatccctgtacgcccccgactggcttacctgccccgaacatccggct
gagctgaaccgtaccatctggacggactcatttcagcgtaatcatgggggagagctaacc
atcgacggcattgcagcgagtgagcttgtcaaagagtttgatactccgcagtacgtattt
tcggaagatacattccgagctagggcacgcgggtaccgccaggcattcaaggatgctttc
gcccggtatggcgcgcaggtgagtgtctactacgcaggaaagtcattcttgtgcacgtcc
gtggcgcggtgggcgcatgaagaaggtttgtgtcttgatacggcatcgggaggggaactg
gcgattgccctgcgggctcaggttcccgggcaaaatattgcgctgcacggtaataacaag
tcgcacggcgagattgtgcgcgccatcaaacacggagtagggcgtgtggtggcagattcc
gttgacgagcttaaactcatcgcggatgtgcatgccgagctgaacgcagaacgcgctgca
gcggggcaggagccgtatccggcggttcccgtgctcattcggattacgcccggtgtacat
gcctccacccacgaatctattgctacggcgcatgaagatcaaaaatttgggatgtcgctt
cagcctggaaccgcgcgtcttgccgggttagaggcagatgaacttgagtattggtcaacc
actgaggacgaatcctacgcgatgcttgccgccggtatcctcaccgctacggattccctg
gaatttcggggtattcactgccatataggctcacagatttttgaggcgcagggcttcgag
caggcggcagatacggctcttacctttatgcacgccgtgaaccagaaatacggtcttagc
ctgcctgagcttgacctgggcggcggctacggtattggctataccgaggccgataccccg
cgcagtattgagcagattaccgtctcgattgcggatgcagtcgcggcaacctgcgtgcgt
cttggcctggcgattccgcatatgtcttttgaacctggccgctcgatttcaggcccctca
ggggtgacgctttacaccgtcggcaccatcaaaaacgtgagtattgaggatgagcacggt
cagattcgagtgcgccggtacgtctctgtggacggcggtatgagtgataatgcgcgccca
gtgctctatgacgccgactatgcggtaaccctggcaaaccgcgccccggcgggagagcac
gtgctttcacgtgtggtaggtaaacactgcgaatcgggtgatattgtggtgcggtattgc
tatcttcctgctgacctgcgtgcgggggatattctcgcggtgccagctaccggtgcgtac
tgttatgtgctggggtcgaactataactacctgagccgtccgccggttattgctacgtcg
gcgggggaagcggcgcatcctattattcgtcgccaaagcgaagatgagatgcttgctctc
gatacgggcttctag
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