Rothia dentocariosa: HMPREF0733_11752
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Entry
HMPREF0733_11752 CDS
T01343
Symbol
cydC
Name
(GenBank) thiol reductant ABC exporter, CydC subunit
KO
K16014
ATP-binding cassette, subfamily C, bacterial CydCD
Organism
rdn
Rothia dentocariosa
Pathway
rdn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF0733_11752 (cydC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rdn02000
]
HMPREF0733_11752 (cydC)
Transporters [BR:
rdn02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
HMPREF0733_11752 (cydC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_29
AAA_16
RsgA_GTPase
Rad17
AAA_22
AAA_23
T2SSE
MeaB
Motif
Other DBs
NCBI-ProteinID:
ADP41209
UniProt:
E3H1C1
LinkDB
All DBs
Position
1941754..1945617
Genome browser
AA seq
1287 aa
AA seq
DB search
MSKLGNTPEKISTLTLAVGKERDVSPRANKTQRNNDKRPPLGPDARKNLGIFGLITGIHT
LATVIFSAALASLIARAAHAGFTALAAEHEHLKAASDPETYRALIEFSGNSQAKLDSTNG
WLLGLGNLLGTGNAITWGLIVTALIALAVRAGADYALSVSAQRAAVGAKASIRQKLVHRV
LATGGADTPEGTGATAVLLARGLNALDDYYTKTLTAFVSVAVVPVLLWLIVLSLDITSAL
VLACTLPLIPIFMILIGKTTREDTAAAQAELHRLSDHILELIRGLPVLIGLGRERAQTRA
LRKLGEQYRERTMQTLRSAFMSSLALELITTISVALIAVLIGVRLVQGTLGLDTAILVLL
LAPECYQPLRDVGAAYHQSEDGIAALRSARTVLDTPVPEASADASCEKVSTAPETPEHLV
IENLSVTYPGRTQILNSVNLNIPRTSKRPSAAGKQRGALVGILGPSGCGKSTLLGVLSGS
VRDGLVPTGASEPIKVTGRIIGTGSPLSIPQNPIFAAPTVLHEMALYAFSADRSEEDYAA
KLLTGETQICPSDRERLENYLWNLGLENLSELSPESLSAGQARRLACARILARIDALHRA
ADHHQNLQITVLVDEPTAHLDAHAAHLVTQSLDALAERGVTVLIVTHETELTEYCDSVVQ
ASAVVEGAHAKPSHEQAYRWSIVQNETPKIIPAAAPHKQDSADTFAEHSPTLHNAPEKMV
RENTGHAVGVVKTLKTLRNLTGLGILQGLPPVILAALTSLAAISLTALSGWLIVRAAEGP
AMMFLMVAIVGVRFFGLGRACARYAERLLTHAKVLTAANNLRVRAWTGAYLNVGSVRALL
RGDALLERLIGGIDELRDRIPRVLIPPAAHVLVMLTALITTIVVLPQAIVPVALAALITT
ILVPWAVTRADAHAEETTRESTAELLRLGAGVLSAAEDIRANGVAPSIEIATTRLNDRNV
AALTRTSYAQGLGRALVTLSWFGAALWCAIIAYPLAVSGTVGAPESAAVVLMCTAMIESS
VQHIEAVRSWPSFATLLAQIAPGIADENSISDLEDDTQDTSHAGRVRAPQGQEPALELVD
AAARWPSMDKPVFEHLNATAHTGKWTGITGPSGSGKSTVLATLLGFLPLEAGEIRSYGKA
LGNDQLRGYAAWCPQAAHIFESTLEGNLLLARDHADRPSEEQMIGALQRVGLGEWYSTLP
EGLHTRVGAGGGFLSGGQRQRLAVARALLVESPVLLLDEPTAHLDSESAAALMTDLDTAT
RTSGMATVLVSHRPEDIARCDAVVTLE
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaaactaggaaacacaccggagaaaatatccacactcactttagcggtagggaag
gaacgagacgtgagcccacgcgccaataaaacacagcgcaacaacgataaacgtcctccg
ctaggaccagacgcccgtaaaaacctagggattttcgggcttatcaccgggatacacaca
ctggcaaccgtgatctttagcgcggcgctcgcatccctcattgcccgggcagcccacgcc
ggatttactgcgctcgccgccgagcacgagcatctaaaggccgccagcgatccagaaacc
tatcgcgctctcatcgaattctcgggtaactcacaagcgaaactcgacagtaccaatgga
tggcttctaggactaggcaatcttcttggcaccggaaacgccataacgtgggggctaatc
gttacggcgctgatagcgcttgctgtacgtgcaggcgccgattacgcgctgtccgtaagt
gctcagcgtgcagccgtaggagccaaagcaagtatccgccaaaaacttgtgcatcgtgtc
ttagccacaggaggggcagacacccctgaaggtacaggtgcaaccgccgttctgctggcg
cggggactgaacgcgctcgatgattattacactaaaaccctgaccgcctttgtctcggtc
gccgtagtgcccgttctactatggcttattgtgctctcactggatatcacaagtgccctc
gttctagcgtgcaccctgccgcttattcccatcttcatgatacttatcggtaaaaccaca
cgtgaagataccgccgctgctcaagccgagctgcaccgtctatcagaccatattcttgaa
ctcatccgtgggctgcccgtgctgattgggctggggcgtgaacgtgcacaaactcgtgcc
ctcaggaagctgggtgaacaataccgcgaacgtaccatgcagacgcttcgcagcgcattt
atgtcttcgctcgctttagaacttatcacgaccatctcggtggcgctgatcgccgtgctc
attggcgtgcgtttggtacagggcacactcggactcgataccgcaatccttgtactcctg
ctggctcctgaatgttaccagcctttgcgtgatgtaggtgcagcctaccaccaatctgaa
gacggcatagccgcactccggtctgcacgtacagtccttgatactcccgtaccagaagcc
tctgcggatgcttcctgcgaaaaggtatcgacggctcccgaaacacccgagcaccttgtg
attgagaacctctcggtcacataccccggacgtacacagatcttaaactcagtaaacctg
aacattccacgtacttcgaagcgcccaagcgcggcaggaaaacagcgcggagcgttagta
ggcattctgggaccatcaggatgtggtaaatcaacgctcctcggagtactttccgggagc
gtccgcgacggattggtaccaaccggagcatccgaaccgattaaggtaaccggacgcatt
ataggtaccggcagccccctgagtattccgcagaatcctattttcgccgctcccacagtc
ctgcacgagatggcgctctatgccttcagcgccgatcgcagcgaagaggactatgcggct
aaacttctcacgggggaaacacagatatgcccctcagatcgtgaacgcctagagaactat
ttgtggaatctcgggctcgaaaacctgagcgagctcagccccgaatcgctcagcgcgggt
caagcgcgcaggttggcgtgcgcccgcatcttagctcgcattgatgccctccaccgtgca
gccgatcaccatcaaaatctccagattaccgttctagtagatgaacctaccgcccacctg
gacgcacacgccgcccaccttgtaactcagtctctggacgcactcgcagaacgcggagta
accgttctaatcgtgacccatgaaacggaacttaccgagtactgcgatagtgtggtgcag
gcatcggcggtagtcgagggagcgcatgcgaaaccatcgcatgagcaagcgtatcggtgg
agcatcgtccagaatgagacacccaagattatccccgctgcagccccgcataagcaggac
tcagccgatacctttgctgagcatagcccaacgttacacaacgctcctgaaaagatggtt
cgagaaaacacaggacatgctgtcggagtcgtgaaaaccctcaaaacactgcggaatctt
acgggactaggtatattacagggactgccgccggtcattcttgccgccctcacctccctt
gccgcaatttctctgaccgcgctctcaggatggcttatcgtacgcgcagccgaaggtcca
gccatgatgttccttatggtagctatcgtgggcgtgcgcttctttgggctagggcgtgcc
tgtgctcgatatgccgagcgtttgctcacccacgctaaagtcttgaccgcagcgaataat
ctgcgtgtgcgcgcctggaccggggcctatcttaatgttggcagcgtgcgggccctgctt
cgcggagacgccctgctggaaaggcttattggcggcatagatgagctgcgcgacaggatt
ccgcgtgttctcattccacctgccgcacatgtgcttgtgatgttaacagcactaataacc
accattgttgtgctacctcaggctattgtgcccgtagcgctcgcagctttgataacaaca
attctcgtgccatgggctgttacgcgcgcggacgctcacgctgaggaaaccacacgtgaa
agtacagctgagcttttgcgtttaggcgcgggtgtactgagtgccgcagaagatattcgc
gctaacggggttgcgccgagcatcgagattgctacaacacgtttgaatgaccgcaatgtt
gccgcattgactcgcacctcgtatgcccaaggtcttggtagggcgcttgtgaccctgagc
tggttcggagcagcactgtggtgcgcaattatcgcgtatccgttagcggtatcgggaacg
gtaggtgctccggaatctgccgccgtagttcttatgtgtacggcaatgatagaaagttcc
gtgcagcatatagaagcagtgcgttcgtggccttcttttgccactctgttggcgcagatt
gctcccggtattgcggatgaaaatagtatttcagaccttgaggacgatacacaggataca
tctcatgctgggcgtgttcgcgcccctcaggggcaggaacctgctcttgaacttgtcgat
gctgccgctcggtggccgagcatggacaagcccgtttttgagcatcttaacgctacggcg
cataccggaaagtggacgggaattaccggtccctcaggttcgggcaagagcaccgtgctg
gcgactcttttgggcttcctgccgttggaagctggcgaaattcgctcctacgggaaagca
ctggggaacgatcagctccgcgggtatgcggcatggtgcccacaggctgcgcatattttt
gaatctactcttgaaggcaatttactcttggcgcgcgatcatgctgatcgcccgagcgaa
gaacaaatgataggggccctgcaacgtgtaggtttgggggagtggtacagcaccttgccg
gaaggtctgcacactcgtgttggtgctggtggcgggttcctttcgggaggtcaacggcag
cgtcttgcggtggctcgtgctctgctcgtggaatctccggtgcttctgctggatgagcct
accgcgcatttagattctgaatcagctgcggcgcttatgactgatctggacactgcaact
cgcaccagcggaatggcaactgttttggtctcgcaccgccccgaagatattgcccgctgc
gatgcggttgttacattggaatag
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