Rothia dentocariosa: HMPREF0733_11759
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Entry
HMPREF0733_11759 CDS
T01343
Name
(GenBank) DNA gyrase/topoisomerase IV, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rdn
Rothia dentocariosa
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rdn03032
]
HMPREF0733_11759
03400 DNA repair and recombination proteins [BR:
rdn03400
]
HMPREF0733_11759
Enzymes [BR:
rdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF0733_11759
DNA replication proteins [BR:
rdn03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0733_11759
DNA repair and recombination proteins [BR:
rdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0733_11759
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF4890
Inp1
FliT
Motif
Other DBs
NCBI-ProteinID:
ADP41216
UniProt:
E3H1C8
LinkDB
All DBs
Position
complement(1952214..1954742)
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AA seq
842 aa
AA seq
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MARRSKSAVEDYPVDIVENIVDIDVSAEMESSFLEYSYSVIYSRALPDARDGLKPVQRRI
LYMMQQMGLRPDKGHVKSARVTGEVMGKLHPHGDAAIYDAMVRLAQSFAMRLPLVDGHGN
FGSLDDGPAAARYTEARMAPAATALTADLDEDVVDFVPNYDNQFMQPGVLPAAFPNLLVN
GTTGIAVGMATNMAPHNLREVIAGTRHLIAHPDATLKEIMKFIPGPDLPSGGTIVGLSGI
KDAYESGRGTFKTRAKVSIEQVTPRKQGIVVTELPYMVGPEKVIEKIKDGVNAKKLTGIS
DVVDLTDRKHGLRLVIEIKNGFNPQAVLASLYKHTPLEDSFGINNVALVNGQPQTLGLLD
LLRVYIDHRLSVVRRRTEFRLGKHKDRLHLVDGLLIAIVDIDEVIEIIRSSDETAQAREK
LMAVFDLTEVQANYILELRLRQLTKYSRIELEAERDKLRQEIAELERILGSDSALRELVS
DELAEVAEKYGNDRRTVLKTKDDMQSAIEAVSNGASKAKKSLGLALEIADEPCWVLLTAS
GILGRTVGKPMREALVDPGKRIKHDVFTSIVPTTARGEIGAVTSTGRMVRLSVMDLVVFD
DSSGTPVLTTGVKATEVVALAKGEKLVGLVPLNEVLALATANGVIKRVNPEYPLNQTEWD
VIKLKPKDTVIAATVCSSDDNALTLVTQEAKLLTFDAAKVRPQGRAGGGIAGIKLGAQDA
VIALGVTAPGSAAEVVTVTNGQDGMASAKVTPLAEYPQKGRATGGVRAHRFLTGESKLAL
AWVGVGPAKAGTPGGVARSLPTEHGSRDGSGVPLTQAIGAVGPNYAAITEQAKMASDGEK
LF
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgcagcaagtccgccgttgaagattacccggttgatattgtcgaaaatatt
gtcgatattgatgtctctgccgagatggaatccagctttttggagtactcctactcggtt
atttattcgcgtgctctgccggatgcgcgtgacgggctgaaaccggtgcagcggcgcatc
ctctacatgatgcagcagatggggctgcgcccggataaggggcatgtgaagagcgcccgc
gtgaccggcgaggtcatgggtaagctgcacccgcacggtgatgccgctatttacgatgcg
atggtgcgtttggcgcagtcttttgcgatgcgcctgccattggtggatgggcacggtaac
tttggttcgctagacgacggcccggcggctgcccgctatacggaggcacgcatggctccc
gcagcgacggcgctgactgcggatcttgacgaagacgttgttgattttgtgccgaactac
gataaccagttcatgcagccgggcgtgctgccagcagcgttccctaacctattggtcaat
ggtacaaccggcatcgcggtgggtatggcaacgaacatggctccgcataacctgcgcgag
gttattgcgggtacgcgacatttgattgcgcatcctgatgccacgctcaaagagattatg
aagttcattcccggccccgatctgcccagcggcggcacgattgtcggattgagcggcatt
aaggatgcctacgaaagcgggcgcggcacattcaagacccgtgccaaggtctctattgag
caggtgaccccccgtaaacagggcattgtggtgactgaactgccgtatatggtgggcccc
gaaaaggttattgaaaagatcaaggacggcgttaacgccaagaaactgaccggtatttct
gatgtggtcgatttgaccgaccgcaaacacgggctgcgccttgttattgaaattaagaac
ggttttaatccgcaggctgtgctggcctcgctgtataagcacacgccgttggaggattct
ttcggcattaataatgtggcgctggtgaatggtcaaccgcagaccttgggactgcttgat
cttctgcgggtgtatattgatcatcgtctgtcggtggtgcgccgccgcaccgaattccgt
ctgggtaagcataaggaccgtctgcatttggtggatggtctgttgattgccattgtcgat
attgacgaagttattgagattattcggtcttcggatgaaaccgcgcaggctcgtgagaag
ttgatggcggtcttcgatctgacggaggttcaggcgaactatattcttgagttgcgtctg
cgccagcttacaaagtattcccgcattgagcttgaggctgagcgtgataagttacgccag
gagatcgctgagctggaacgtattttgggttccgattctgcgctgcgtgagctggtatct
gacgagcttgccgaggttgccgagaagtacggtaacgatcgccgtaccgttttgaagacg
aaagacgatatgcagtctgcgattgaggctgtctcaaacggggcctcaaaggcgaagaag
agcctcgggttggcgcttgaaattgccgatgagccctgttgggtgctgctgacagcttcc
ggcatactggggcgcacggtgggtaaaccaatgcgtgaggctctagttgatccgggcaaa
cgcattaaacatgacgtcttcacctctattgttcccacgacggcgcggggcgagattggt
gcggtgacctctacaggtcgcatggtgcgcctttcggtcatggatttggtggtgttcgat
gattcttcgggaactcctgtattgactacgggcgtcaaagctaccgaggttgttgccttg
gcaaagggtgagaagctggtggggcttgtgccgttgaatgaggtacttgcgctggcaacg
gcgaacggcgtgattaagcgcgtgaacccggagtatccgctgaaccagacggagtgggac
gttatcaagctcaagccgaaggatacggtcattgccgcaaccgtgtgctcttccgacgat
aatgccctaacgttagtcacccaggaggcgaaacttctgaccttcgatgcggctaaggtt
cgtccacaaggccgcgcgggcggcggtatcgccggtattaagctgggcgcgcaggatgcg
gtaattgcactcggcgtgaccgccccgggttctgccgccgaagttgtgaccgttacgaac
gggcaggacggtatggcgagtgcgaaggtcactcccctagcggagtacccgcagaaaggc
cgcgcgactggtggcgtgcgggcgcatcgtttcttaacgggagagtcgaagctggcactg
gcgtgggttggcgttggccccgcaaaggctggcacgccgggcggtgtggcgcgttccctg
ccgaccgagcacggttcacgtgacggctcaggtgtgccccttacccaggcgatcggcgcg
gtaggccctaactatgcggctatcactgagcaagcaaaaatggcgtctgacggggaaaag
ttgttctag
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