KEGG   Rothia dentocariosa: HMPREF0733_11854
Entry
HMPREF0733_11854  CDS       T01343                                 
Name
(GenBank) helicase C-terminal domain protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rdn  Rothia dentocariosa
Brite
KEGG Orthology (KO) [BR:rdn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rdn02048]
    HMPREF0733_11854
Enzymes [BR:rdn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HMPREF0733_11854
Prokaryotic defense system [BR:rdn02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HMPREF0733_11854
SSDB
Motif
Pfam: ResIII SWI2_SNF2 DEAD HSDR_N Helicase_C EcoEI_R_C DUF4145 HSDR_N_2 DUF4407 SLFN-g3_helicase APG6_N AAA_19 MRPL52
Other DBs
NCBI-ProteinID: ADP41311
UniProt: E3H201
LinkDB
Position
complement(2059221..2062646)
AA seq 1141 aa
MSNFDFLKQSIPEVHPNALKTESALRIDASMVAIYARITLEQLVDYLYRARSLQNPYGKS
TPTLVDRLRNPEFQNLVRHPALHDKMRLIRLAGNKAAHGNRISGDVAMQTVRDLHHLLVW
AARYHSPYGSAIDPRAAFEVTKVPQLPGSAPQQKVSQKELIKLAEELEQAREAHQAQLAA
KEAENKALQERLADLEAQLKTTFTETTPQDIRDYNEAETRTALIDVELELAGWDTSAENL
REVSIPNIPIRKDGSLGTGKADYVLWGTDGKPLAVIEAKRASRDSHEGERQAELYAQGLY
RMYGVYPVIITTNGTQHKLWDQWKDSPTGKPGYQVRSILAFPTRNDLERLHARRRAQPLN
NAPISHDLVDRKYQINAVRSVGTAFDAENRRRALLVMATGAGKTRISMAIVKMLSDAGWV
KNTLFLADRVSLVNQAVNAFRSHFRTEMSIVNLLTDKDTSGRVYGCTYPTIMNLIEQRKF
SPGFFDLVVIDEAHRSVYSKYKQIFEYFDALLVGLTATPKDDVDHDTYELFGLNQGEPTD
YYSLEQAVDDGYLVPPRGISLSTDFLSDGIHYDELSDDDKAKWDLIEWDEETHEKPNHIP
SHLLNDYLFNKQTVDHVLSELMTQGYRVENGNKLGKTIIFAHNQNHANYIRQRFDALYPQ
YGGTFARVITHSTERAQSLIDDFSDPEKMPQIAVSVDMLDTGIDVPEVLNLVFFKPVRSY
AKYWQMLGRGTRLCSDVFGPGTKKTDFKVFDCCRNLEFFRSDFKAPNGTPQKPQATRTFE
TTLALLVELDSHAGELSSADYESLRPALVGQLRTFINSLNTDSPFVRKHLHAVQRMQDES
IWSSALNTEAQEQILSLAELGGNIGEGAPVALSFDLTIRKLQLDLLDGNIAAAKPRLERL
RKIALGLSKLVDTIPDVERQKAHFDYVLSEAWGPQVSLAYLESIRQDVRGLLSLLSKSER
KPFYTDFADHAHESIETEILLNTTGTVSPQEFEAKIQYRMRELLDNPAVQKARKGYALND
ADMQELDAAFVASGEFTVDDILTVRQDHPNLGLYVRSMVGMDRKAVQKHLKEFIREDTTQ
AQLDLLKMLTDALVDDGTVEPKALYGIPYSDEYTIDYVWTSRVAQTVKNINDGLPQSVQG
S
NT seq 3426 nt   +upstreamnt  +downstreamnt
atgagcaacttcgacttcctgaaacagagcatcccagaggtgcacccgaatgctctcaaa
actgagagcgccttgcgtatagatgcttccatggttgctatctacgctcgaattacgctt
gaacagcttgtcgattatctctatcgtgcgcgcagcctccagaacccttatggcaagagc
acgcccaccctagtggaccgtctgcgcaatcccgagtttcagaacctcgttcgtcatcct
gccctccacgacaaaatgcgcctgattaggctcgccggaaacaaagccgcacacggcaac
cgtattagtggtgacgttgctatgcaaaccgtgcgagacctacaccatctgctcgtctgg
gcagcacgctaccactccccctacggctcagcaatagacccacgtgccgccttcgaggtg
actaaggtaccgcaattacccggatcggctccacagcaaaaagtatcgcaaaaagaactt
atcaagcttgccgaagaacttgaacaggctagagaagctcatcaagcgcaacttgccgct
aaagaagcagaaaataaagctcttcaagaacgattagccgatctcgaagctcaactcaag
accaccttcaccgagactacgccccaggatattcgtgactacaacgaagcagaaactcgt
actgctctcattgatgttgagcttgaactcgcaggatgggatacttcggctgaaaaccta
cgcgaagtttccataccgaatatccctattcgtaaagacggttcgcttggtaccggaaaa
gccgattatgttctctggggtaccgatggcaagccgctcgccgttatcgaagcaaaacgt
gccagtcgagactctcatgaaggagaacgacaggctgagctctatgcgcagggactctac
cggatgtacggggtttacccggtaattatcacaaccaacggaactcaacataagctctgg
gatcagtggaaggatagccctacaggtaaacctggctatcaggtacgtagtattctggcg
ttccccacccgtaacgaccttgaacgtctgcatgcccgcagacgtgcgcagcctctcaat
aatgcgcccattagccacgacctagtcgaccgcaagtatcaaatcaatgctgtgcgttcc
gtcggtactgccttcgacgctgaaaaccgtcgccgtgctcttctcgtcatggcaaccggg
gccggtaaaacacgtatctctatggcaatcgtcaagatgctttctgacgctggttgggta
aaaaatacgctctttctggctgatcgtgtctctttggttaatcaggcggtgaatgcgttt
cgctcccactttagaaccgaaatgagcatcgttaatttgctcaccgataaagacactagc
ggtcgtgtttacggctgtacctatcccaccatcatgaacctgattgaacaacgcaagttt
tcacccgggttcttcgatctagtcgttattgatgaggcacaccgatctgtttactccaaa
tataaacagatttttgagtatttcgatgcccttcttgttgggctgaccgccaccccgaaa
gacgatgtagaccacgatacttatgagctcttcgggcttaatcaaggcgagccaaccgac
tactattcgcttgaacaggcagttgatgatggatacttggtaccaccacggggaatatct
ctgagcactgattttctgagcgatggcattcactatgacgagctctctgacgacgataag
gcgaaatgggacttaattgagtgggatgaagaaactcacgagaagcccaaccacattccc
tcacacctactcaacgattacctttttaacaagcaaactgtagaccatgtactcagcgag
ctaatgacccagggttatcgtgtggaaaacggcaacaaactgggaaaaactattatcttc
gctcataaccagaaccacgccaactacataagacagcggttcgatgccctgtaccctcag
tatggcggtacatttgctcgcgtgattacccatagtactgaacgagctcaatcgttaatc
gacgatttttctgaccccgaaaaaatgccacaaatcgcggtcagcgtcgatatgctcgat
accggtatagacgtacccgaagttctcaatttggttttcttcaaacccgtgcgttcctac
gctaaatactggcagatgcttgggcgtggaactcgcctatgctctgatgtctttggtccc
ggcacaaaaaagaccgattttaaagttttcgattgctgcagaaatcttgagttcttcagg
agcgatttcaaagcacctaacggaaccccacagaaaccgcaagcaacacgcactttcgag
accaccttagctctgctggtggaactggattctcacgctggtgagcttagctctgccgac
tacgagtctctgcgccctgcgcttgttgggcagctgcgtacatttattaactcgctcaat
accgacagcccattcgtgcgtaaacacctacatgcggtacagcgcatgcaggatgaaagt
atctggtcttccgcgctcaatactgaagcccaagaacaaatactctcacttgctgagcta
ggcggcaatattggtgaaggcgctcccgttgcgctttccttcgacctcacgatacgtaag
ctacaactagatctgttggacggcaatattgcggcggcaaaaccgcggttggagcgcctc
cggaaaatcgctctgggtcttagcaaacttgttgatactatccctgacgtcgaacggcag
aaagcgcattttgattatgtactctcggaagcttggggtccgcaggtttccctcgcatac
cttgagtctattcgccaagatgtgcgcggtcttctatctttgctctcaaagagcgagcgc
aagcctttctataccgatttcgccgatcatgcgcacgagagcattgaaacagagattctg
ctcaatacaaccggtaccgtgagtccgcaggagtttgaggctaaaatccagtaccgtatg
cgtgagctgctggataaccctgccgtgcagaaagctcgtaaaggctacgcgctcaatgac
gctgatatgcaggaactcgatgccgcttttgtagcatccggcgaattcacggttgatgat
attctgactgttcggcaggaccacccgaacctagggctttatgtgcgttctatggtgggc
atggatcgtaaggctgtgcagaaacatctcaaagagtttattcgagaggacaccacgcaa
gctcagcttgaccttctgaagatgctcactgatgcgcttgttgacgatggtacggtagag
ccgaaagccctctacggcatcccatattctgatgaatacacaatcgactacgtatggacg
agtcgagttgctcaaaccgtgaagaatattaatgatggactaccccagagcgtgcagggt
tcttaa

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