Rothia dentocariosa: HMPREF0733_11855
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Entry
HMPREF0733_11855 CDS
T01343
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn03030
DNA replication
rdn03430
Mismatch repair
rdn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0733_11855
03430 Mismatch repair
HMPREF0733_11855
03440 Homologous recombination
HMPREF0733_11855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rdn03032
]
HMPREF0733_11855
03400 DNA repair and recombination proteins [BR:
rdn03400
]
HMPREF0733_11855
Enzymes [BR:
rdn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0733_11855
DNA replication proteins [BR:
rdn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0733_11855
DNA repair and recombination proteins [BR:
rdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0733_11855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
DUF1248
Motif
Other DBs
NCBI-ProteinID:
ADP41312
UniProt:
E3H202
LinkDB
All DBs
Position
complement(2062776..2064005)
Genome browser
AA seq
409 aa
AA seq
DB search
MEFTLDFLRALFNLIKNIQRSLTGSHPVSQLNLSHESTSFATEPETIIENTWVIPTYQGR
AICDYTEDIARYKREGNLNEALALALECVNSMRDAALSNHDYVMEYYVVQAAILQHKMKQ
YANEVDLIKGWLDEGIPPAREDHRLDLLKRLAKAQELLAKQQSQDPTPYNREWKELRAQE
VELKERIKAGYSPYTTARHAELKLNSGSSHSSGIKWTKPTRIRKRTSSSYIPTPELLAAS
TYVAVDFETANSVSGASACQIALIKVQNGLVVDRLVSYLKPPAELRRFEFTHLHGISART
VRVAPTWVEVLPAITAFIGSFPVYAHNASFDSKVWQELDDYYNVHTVPTHFFCTYRMAKK
ALPHLENHKLPTVIKACAPKFKLKHHKADSDAEACAYIVLFFQTYGFEA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
ttggagttcactttggactttctgcgtgctcttttcaacctcatcaagaatattcagaga
tccttgacaggctctcaccctgtatcacagctaaatctttctcacgagtcaactagtttt
gcgactgagcctgaaaccatcatagaaaacacctgggtaatacccacgtatcaaggacgg
gctatttgcgattacacagaagatatagcccgttacaagcgtgaaggtaacctcaacgaa
gctctggctctagctctagagtgtgtaaactctatgcgagatgccgcactttccaatcat
gactatgttatggaatactacgttgtgcaggctgccattctgcagcataaaatgaaacaa
tatgccaatgaagttgatctcatcaaaggttggctagatgaaggtatccctcccgctcgg
gaggaccatcgcctcgacctgctcaaacggctcgctaaagctcaagagcttcttgccaag
caacagagtcaagaccccacaccgtacaacagagagtggaaagagctgcgcgcgcaagaa
gtagagctcaaagaacgcatcaaggcaggttattccccttacacaacagctcgtcacgca
gagctaaaactaaacagcggatcttcacattcttcaggaatcaaatggacgaaacccact
aggattcgaaaacgtactagctcttcgtacattcccacgccagaattattagcagcttct
acctacgttgcagtagatttcgaaaccgctaatagcgtcagtggcgcttcggcatgccag
attgcacttatcaaagttcagaatggtcttgtagtagaccgtctggtgagctaccttaaa
ccacccgccgaattacgaagattcgaattcacacacctgcatggaatttctgctcgcact
gtgcgagtagcacccacatgggtcgaagtcctgccagctatcactgcgtttatagggtcg
ttccccgtatatgcccacaacgctagctttgactcaaaggtatggcaagaactcgatgat
tattacaacgtacataccgtgcccacgcatttcttctgtacgtaccgtatggcgaagaaa
gcacttcctcacttggaaaaccataagcttccgaccgtcattaaagcctgtgcgcctaaa
ttcaagctgaaacatcacaaagccgactctgacgctgaagcctgtgcttatattgtgctg
ttcttccagacctacgggttcgaagcctag
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