Rothia dentocariosa: HMPREF0733_11944
Help
Entry
HMPREF0733_11944 CDS
T01343
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
rdn
Rothia dentocariosa
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rdn03019
]
HMPREF0733_11944
Enzymes [BR:
rdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HMPREF0733_11944
Messenger RNA biogenesis [BR:
rdn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HMPREF0733_11944
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADP41401
UniProt:
E3H2G8
LinkDB
All DBs
Position
complement(2167191..2170112)
Genome browser
AA seq
973 aa
AA seq
DB search
MAENPQETTHDSNDRPSYFAQYQAAQERNAHAKTALSKFEKNLGFPLDSFQRQACQSVET
GHSVLVAAPTGSGKTVVGEFGIYLALQTGTKAFYTTPIKALSNQKYHDFVREYGEENVGL
LTGDTSINTEAPIVVMTTEVLRNMLYAESTTLIGLGYVIMDEVHYLADRFRGAVWEEAII
HLPEHVTVISLSATVSNVEEFGAWLDTVRGDTDVIVSEHRPVPLWQHLMVGNRIIDLFVP
DETSQQEASPTKRRKNHTKSLQNAPTGLRINPLLKQLRPGFRRHTPRHNAPKRERFRRGR
NRHDKHTHALERSRHKTFTQDANVLSPHRIPRPEMARILDKQGLLPAICFIFSRAACDDA
VTQCVNANIVLTTEEQQQTIRAYIAETTAHLDNRDLHALGYYEWRDGLIRGVAAHHAGLL
PLFKEVVETLFAQGLIKLVFATETLALGINMPARTVMLEKLTKFNGETHVDITPGEYTQL
TGRAGRRGIDLEGHAVVLWRPGLVPEQVATLASTRTYPLNSSFRPTYNMAANLIAAYGAE
RTRKILESSFAQFQADKSVVGTAARVRKNENALEGYRDSMQCHLGDFTEYMRLRQNIKDL
EKKTRKANQQHARAQAHQSIQELMPGDIIHIPHGRSRGYAIVITRAESNTDPRIGILTED
NQQRTASARDFTGLIEPVSYIKLPKKITLKTSKERRDTTSRMRQALIDERPPRKLGNTPI
ATRHNDAQEKLDILRAQLRNHPCHGCSDRETHARWAERWRKLNAETEGLRRQITRRTNTI
AQVFNRIAKLLTEYGYVTADSHNGLKLTTKGEALRKLYGEKDLLTSICLEKGFLTDLDPA
AIAATIAALTYQGKKETIEILPRYPHPSLQVSIATINRELDHLNVHEERHELDQTPPCDL
GLVTPIYRWARGMHLAKALEDTGLAAGDFVRWAKQVIDALDQIAHIPTISPNLRASCEKA
IALIRRGVVALDS
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaacccccaagaaaccactcacgactcgaacgaccgcccgagctactttgcg
cagtatcaggccgcgcaagaacgtaacgctcacgcaaaaacagcgcttagtaagttcgaa
aagaatctcgggtttcctcttgacagtttccaacgtcaggcatgccaatccgtcgaaact
ggacattcagtccttgtcgctgcgcctactggttctggtaaaacagttgtcggagaattc
ggcatctaccttgccctccaaacaggaacaaaagcgttctatacaacccctatcaaagca
ctcagcaaccagaaataccatgactttgtgcgtgaatacggcgaagaaaacgtaggtctg
ctcaccggcgacaccagcatcaataccgaagcccccatcgtcgtcatgactactgaagtc
cttcgcaacatgctctacgccgaatctacgaccctcatcggtctgggatacgtcatcatg
gacgaagtacactatctcgccgaccggttccgtggagcagtttgggaagaagcgattatt
caccttcccgaacacgtcaccgtcatctcgctctctgcaactgtatccaacgtcgaagaa
ttcggagcatggctagataccgtacgaggtgataccgatgtcatcgtatctgaacaccgc
cccgtcccgctctggcaacacctcatggtaggaaaccgtattattgacctctttgtacct
gatgaaacttctcagcaagaggcttcacctacaaaacgtcgtaaaaaccacacaaaatca
ctccaaaacgctcccacggggctacgcattaacccgctcctcaaacaactgcggccaggc
tttcgccgacacaccccccggcacaatgcacccaaacgcgagcgcttccgacgcggccgc
aaccggcatgacaaacacacacatgcactcgaacgatcccgtcataaaaccttcacccaa
gacgccaacgttctgagtccgcaccgcatacctcgccccgaaatggcccgtatcctagac
aagcaagggctattgcctgccatatgcttcatcttttcacgggcagcatgtgatgacgcc
gttacccaatgcgtcaacgcgaatatcgtcctcaccaccgaggaacagcagcaaaccatc
cgtgcctatattgcagaaaccactgcacaccttgataaccgagaccttcatgcccttgga
tattacgaatggcgagacggactcatccgcggggtggcagcccaccatgcaggtctgcta
ccgctcttcaaagaagttgttgagacactttttgcacaggggctcatcaaactagtcttt
gccaccgaaaccctcgcgctcggcatcaacatgccagcccgcaccgtcatgctcgaaaaa
ctcaccaagttcaacggtgaaacccacgtcgatatcacccccggagaatacacccaactt
accgggcgggcagggcgccgcggaatcgatcttgaaggacacgccgtagtcctctggcgt
ccaggtcttgtaccagaacaggttgccaccctcgcatccactcgcacatacccccttaac
tcatcattccgccccacctacaacatggctgcgaacctcatcgcagcctatggcgccgaa
cgaacccgcaaaatcctcgaatcatcctttgcccagttccaagcagataaatcagttgta
ggaacagctgcacgagtacgtaaaaacgaaaacgcgctcgaaggataccgagactccatg
cagtgccaccttggagacttcacagaatacatgcgcctgcggcaaaacatcaaagatcta
gagaaaaaaacccgcaaagccaaccaacaacatgcacgcgcccaagctcaccaaagcatc
caagaacttatgcccggagacatcattcacatacctcatggtcgctcccgcggctacgct
atcgtcatcacccgtgccgaatccaatacagacccacgcattggtatccttaccgaagac
aatcagcagcgcaccgcaagcgcacgtgatttcacggggctcattgaacccgtctcctac
atcaagctccccaagaaaataacccttaaaacatccaaagaacgccgcgacaccacctca
cggatgcgtcaagcgctcatcgatgaacgaccaccccgcaaactcggaaatacccccatc
gccacacgtcataacgatgcccaagaaaaactcgacatactacgtgcccaactacgtaac
cacccctgccacgggtgctctgaccgggaaacccatgcacgctgggcagaacgatggcgc
aaactcaacgcagaaacagaaggactacgccgccaaattacccgacgcaccaacactatt
gcccaggtcttcaaccgcatcgcaaagctcctcactgaatacggctacgttactgctgac
tcccataacgggctcaagctaacgacgaagggggaagccctgcgcaaactctacggggaa
aaagaccttctcacctctatttgtctcgaaaaaggcttcctcactgatctggatcctgcg
gctatagcagcaaccatagccgcgctcacataccagggcaaaaaggaaaccatcgaaatt
ctcccacgctacccgcacccttcattacaagtgtctatcgcgaccatcaaccgcgaacta
gaccatctcaacgttcacgaagaacgtcacgaactagatcaaaccccaccctgcgaccta
ggcctcgtcacccctatctaccgctgggctcgcggtatgcacctcgcaaaagcactcgaa
gataccggcctcgccgccggcgacttcgtacgctgggcaaaacaagttatcgacgcactc
gaccagatcgcccatatccccaccataagcccaaacctacgagcaagctgcgaaaaagct
atagccctcatccgccgcggagtcgtcgcactagactcctaa
DBGET
integrated database retrieval system
