Rothia dentocariosa: HMPREF0733_11973
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Entry
HMPREF0733_11973 CDS
T01343
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn03030
DNA replication
rdn03430
Mismatch repair
rdn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0733_11973 (holA)
03430 Mismatch repair
HMPREF0733_11973 (holA)
03440 Homologous recombination
HMPREF0733_11973 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rdn03032
]
HMPREF0733_11973 (holA)
03400 DNA repair and recombination proteins [BR:
rdn03400
]
HMPREF0733_11973 (holA)
Enzymes [BR:
rdn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0733_11973 (holA)
DNA replication proteins [BR:
rdn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0733_11973 (holA)
DNA repair and recombination proteins [BR:
rdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0733_11973 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
ADP41430
UniProt:
E3H2S7
LinkDB
All DBs
Position
complement(2202350..2203378)
Genome browser
AA seq
342 aa
AA seq
DB search
MTPRGSSSRGNYRGQRANKALDNAWRTVDPAPVIMLHGSEEYFASRARERLRTAFYSTYP
NADLVTINASTYTAGELTLLASPSLFGTAKIIDADNVATMSEDFLNDVLSYIAAPESDIM
LIMQHSGGNRGKKLIDAIRKNHVLIPCKPLKAEREKTEFVTSEFRAAKRTIDPGALRLLV
AATNDTAELASACAQLQADVAGNITEEIVNRYYGGRTEVTAFRVGDAAVTGNAAEALRLL
RHALATGTEPIPLLGALAMRIRNIARLHHVRASAQELAREVGMAPWQVEQAQRDGRRFTG
EQIARIVQLLADADAQLKGEGLDPVYAVERAVLAIALPHNRS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgactcccaggggaagctcatcacgcggcaactaccgcggccaacgcgctaataaagcg
cttgataacgcatggcgcaccgtagatcccgcaccggtcatcatgctccacggttccgaa
gagtatttcgcctcacgagcacgtgaacgtctgcgcaccgctttttatagcacctatcca
aatgcagacctagtcaccatcaacgcttcaacctacactgcgggggaactcaccctcctc
gcgagcccgtcgctctttgggactgccaaaataatagatgctgacaacgtcgccaccatg
agtgaagatttccttaacgatgttctcagctacattgctgccccagaatccgacattatg
ctcatcatgcagcattccggcggtaaccgcggcaaaaaactcattgatgccatacgtaaa
aaccacgttcttattccctgtaaaccgctcaaagccgagcgcgaaaaaacggaatttgtc
accagtgaattccgagcggctaaacgcactatcgatcccggcgccctacgcctactcgta
gccgccaccaatgacaccgctgaactcgcttccgcctgtgctcaacttcaagcagatgtt
gcgggaaatattaccgaagagatcgtgaaccgttactatggcgggcgaaccgaagttacc
gcttttcgggtgggagacgccgctgttacgggaaacgcagcagaagcgcttaggcttttg
cgacatgctttagcaacgggaacagaacctatccctctgttgggggcacttgccatgcgt
attcgcaatattgcccgcctgcatcatgtgcgtgccagtgcccaggaacttgcccgtgag
gtaggtatggctccatggcaggttgaacaggcacaacgtgatggaaggcgtttcaccggt
gaacagatcgcccgtatcgtgcagctacttgctgatgccgacgcacagctcaagggggag
ggcctagacccggtatatgcggttgaacgtgcggtacttgccattgcgttgcctcataac
cgctcataa
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