Rothia dentocariosa: HMPREF0733_12004
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Entry
HMPREF0733_12004 CDS
T01343
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF0733_12004 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rdn01007
]
HMPREF0733_12004 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rdn03016
]
HMPREF0733_12004 (alaS)
Enzymes [BR:
rdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
HMPREF0733_12004 (alaS)
Amino acid related enzymes [BR:
rdn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HMPREF0733_12004 (alaS)
Transfer RNA biogenesis [BR:
rdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HMPREF0733_12004 (alaS)
Prokaryotic type
HMPREF0733_12004 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADP41461
UniProt:
E3H2V8
LinkDB
All DBs
Position
complement(2239739..2242420)
Genome browser
AA seq
893 aa
AA seq
DB search
MLSQEISKRWIEFFEKRGHTVVPSASLISNEPGAMFTIAGMVPFIPYFLGRETPPFSRAT
SVQKCIRTLDIEEVGKTARHGTFFQMAGNFSFGDYFKEQAIPFAYELLTASQDKGGYGLD
PERLWVTIYEGDNEAFDVWTKTVGFPEERIQRMGMKENYWSTGQPGPAGPDSEIFYDRGP
AYGKEGGPAVDDDRYIEIWNLVFMQYQRGEGIGKEDFEILGELPKKNIDTGLGVERLAML
LQGVENFYETDQVRPVLDAASKLSGKKYHGSESPEDPGYEDDVRMRVVADHIRSSLMLIA
DGVTPSNEGRGYILRRLMRRAIRAMRLLGVTEPCLPILFPASRDAMAGAFPYVADDFERI
SRIAYAEEKAFLHTIETGTERLEEAVATAKKDGSNSVSGAEAFALHDTYGFPIDLTLEMA
AEAGVKVDEKAFRELMAEQRHRAQADAKAKKGSFADLSELRKLVDERGSIFTGYTELRTE
THLRALLKDGVSVPVAKAGDKIEVVLDETPFYAEGGGQAADTGVITGNGFVIDVQDVQQP
VKGLSVHRAVVREGEAHPGAEVVAQVDVQRRRDGEKAHSGTHIVHAALHQVLGNEATQRG
SFNKEGYLRFDFAWGESLSDSAKREVEEVANLAIRDNHEVIAREMPLAEAKALGAMSLFG
EKYGNIVRMVEIGGEFSRELCGGTHVGTSSEIGSLTLLTEQSVGSGNRRVEALVGMNSFE
HLAAERTLVNQLTGMMKVQSSAELPEKINQTLAKLKSAEKELEKLRREKLQAEAGKLLEN
AQTIGSVRVLTHHAGELDANGVRSLALDLRSRFGSEAAVVAVTGVANGRPVILVATNEGA
REAGIKAGALVRLAAGILGGGGGGKDDVAQGGGQDASKVSEALDAIRNAIAQA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgctctcacaggaaatttctaagcgttggatcgaatttttcgagaagcgcggacatacc
gtggtgccttctgcatcactcatctcaaacgaacccggtgccatgtttaccattgccggt
atggtgccctttatcccttattttcttggacgagagacccctccgttctcgcgtgcaaca
agcgttcagaagtgtattcgtaccctcgacattgaagaagtaggtaagaccgcccgtcat
ggcaccttcttccagatggcgggtaacttttcattcggtgactatttcaaagagcaagct
attcctttcgcctacgaactactcaccgctagccaggataaaggcggttacgggttagat
ccggaacgtctgtgggtgaccatttacgaaggagacaatgaagccttcgacgtatggact
aaaaccgtaggattcccagaagaacgtattcaacgcatgggcatgaaggaaaactactgg
tctacaggtcagcctggtcctgcaggccccgattccgaaattttctacgaccgcggaccc
gcatacggcaaagaaggcggtccggcggtagatgacgatcgctatattgagatctggaac
cttgtgttcatgcagtatcagcgtggtgaagggatcggtaaggaagacttcgagattctg
ggtgaattgcccaagaagaatatcgataccggtttaggcgttgagcgtttggcgatgctt
ctgcagggtgttgaaaacttctacgaaaccgatcaggtgcgcccggtacttgacgccgct
tcgaagctctccgggaaaaaataccacggctctgaatctcccgaagatccggggtatgaa
gacgatgtgcgcatgcgtgtggtcgcggaccatattcgctcttctctcatgctgattgcc
gatggtgtgactccctccaacgaaggacgcggctatattctacgccgcctgatgcgccgc
gctattcgtgcgatgcgtctgctgggcgttactgaaccgtgcctgcctatcctattcccc
gcttctcgcgatgcgatggctggtgctttcccctacgtggcggatgatttcgagcgtatt
tcccgcatcgcttatgccgaggaaaaggcatttttgcatacgattgaaaccggcaccgag
cgtttggaagaagccgttgctacggctaagaaagacgggtcaaactctgtttctggggca
gaagcatttgcgctgcacgatacctacggattcccaatcgacctgacccttgaaatggcc
gctgaagcaggcgtaaaggttgatgagaaggcgttccgcgaactgatggctgagcagcgt
caccgtgctcaggctgatgctaaggctaaaaaaggttctttcgcagatctctctgagctt
cgtaagctcgtggatgaacgtggttctatctttaccgggtacaccgaacttcgcactgag
actcatcttcgtgctttgctgaaggatggggtttccgttcccgtagctaaagcgggcgat
aagattgaggttgttttggatgaaaccccgttctatgcggagggcggcggacaggcagct
gataccggcgtgattactggaaacggtttcgtgattgatgttcaggacgtgcagcagcct
gtcaagggtttgagtgttcaccgcgccgttgttcgtgaaggtgaagcgcatccgggcgct
gaagttgtggcgcaggttgatgtgcagcgacgtcgagatggtgaaaaagcccattcgggt
acccatattgttcatgcggctttgcaccaggtattgggtaatgaagcaactcagcgtggt
tccttcaataaggaaggctacctgcgttttgacttcgcatggggtgagagcctatctgac
tccgctaagcgtgaagtcgaagaggtagcaaacctcgctatccgggataatcacgaagtt
attgcgcgtgagatgcctcttgccgaggctaaagccctaggcgctatgagcctcttcggc
gagaagtatggcaacatcgtgcgtatggtcgaaatcggtggagagttctcgcgtgagctt
tgtggcggcacccacgtaggaacttcatctgaaattggttctctgactctgctcactgaa
cagtctgtgggctcgggtaaccgccgcgttgaggcactggtcggtatgaattctttcgag
catcttgccgctgagcgtaccctagtcaatcagctgaccggcatgatgaaagtgcagtcc
tcggctgaactacccgagaaaataaaccagacgttggcgaaactaaagtcagctgagaaa
gaacttgaaaagctgcgccgcgagaagcttcaggctgaggctggtaagcttttagaaaac
gcgcaaaccatcggcagcgtacgagttcttacacatcatgcgggagagctggacgccaac
ggtgttcgttcgctagcgttagatttacgttcacgcttcggctctgaagctgccgttgtg
gcggtgactggcgtggccaatggtcgcccggttattcttgtcgccacaaatgaaggtgcc
cgtgaagctggcattaaagccggtgccttggtgcgactcgcagcaggtatactcggcggc
ggtggcggcggcaaggacgatgttgcacagggcggcggacaggatgcttcgaaggtttca
gaagcactggatgctatccgcaacgcgatagcgcaggcataa
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