Rothia dentocariosa: HMPREF0733_12045
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Entry
HMPREF0733_12045 CDS
T01343
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
rdn
Rothia dentocariosa
Pathway
rdn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0733_12045 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdn03400
]
HMPREF0733_12045 (uvrA)
DNA repair and recombination proteins [BR:
rdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0733_12045 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMPREF0733_12045 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
nSTAND1
AAA_15
AAA_25
APS_kinase
AAA_23
DnaJ_CXXCXGXG
NACHT
ATPase
cobW
Viral_helicase1
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
ADP41502
UniProt:
E3H2Z9
LinkDB
All DBs
Position
complement(2288942..2291830)
Genome browser
AA seq
962 aa
AA seq
DB search
MPPRAGSATAPLQSNDLSSIRVQGARENNLKNVDLTIPRDAMVVFTGLSGSGKSSLAFDT
IFAEGQRRYVESLSSYARMFLGQVDKPDVDFIEGLSPAVSIDQKSTSKNPRSTVGTITEI
YDYMRLLWARVGRAHCPVCGEEITKQTPQQIVDALLEYPERTRLQVLAPVVSARKGEFVD
LFKDLVTQGYSRARVDGKTVQLSDPPKLAKQYKHTIDVVVDRIVIKESIHQRLTDSVETA
LRLADGRLLIEFVDVQADSPERTRTFSENLACPNNHPLQVDTIEPRAFSFNSPFGACQAC
DGIGSRLEVDEDLLVPNPDMTLGEGAIAPWSQGKSTTEYWLRLLAGLGEELGFDLNTPWK
DLPAKVRKAILEGKDFKVEVSYRNRFGRERRYTSGFEGVKANIMRKHQETESDFARDRYE
QYMRQVACPVCHGARLNPTILSVKIEGKSIADVTAMPLRAALDFMRALKLTPREAKIADQ
VLKELDARLQFLLDVGLDYLTLSRSAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIG
LHQRDNRRLIDTLTKLRDMGNTLIVVEHDEDTMREADWIVDVGPGAGEHGGEIVHSGTYK
ELLSNKKSITGDYMAGRRSIEVPKKRRPHDRKRVLKVYGARENNLKNVDVTFPLGVFTAI
TGVSGSGKSTLVNDILYTSLANKLNGAKQVPGRHKKVDGLEHLDKVIHVDQSPIGRTPRS
NPATYTGVFDHIRKLFAETNEAKVRGYTPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDV
YVPCETCQGKRYNRETLEVHYKGKTISDVLEMPVEEAAEFFAAFTPIARHLNTLVDVGLG
YIRLGQPATTLSGGEAQRVKLAAELQKRSNGRSIYVLDEPTTGLHFEDIRKLLTVLQSLV
DKGNTVITIEHNLDVIKCADWIIDMGPEGGDGGGTVIAEGTPEDVAQVEESHTGRFIKEL
LV
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccgcgctggatcagcaaccgcccctttgcagtcaaacgacttgagcagcatt
cgtgtgcagggtgctcgcgaaaacaacctcaagaacgttgatcttacgattccacgtgac
gcaatggtggtttttacgggtctatcgggatcgggtaaatcttcacttgctttcgacact
atcttcgcagagggacagcgcaggtacgttgaatcactatcttcctacgcgcgtatgttc
cttgggcaggtagataagcctgatgttgattttattgaggggctatcgccagcggtctct
atcgaccagaaatctacttcaaaaaacccgcggtcgacggtaggcaccatcaccgagatt
tacgattatatgcgcctgctgtgggcccgtgtaggacgtgcgcactgcccagtgtgcggt
gaagaaattaccaagcaaaccccgcagcagattgtcgatgcactgctggaataccccgag
cgtacgcgtttgcaggttcttgcccccgtggtatcagctcgcaaaggtgagtttgttgat
ctgttcaaagacctggtgacacagggctattcgcgtgcccgggtggacggaaaaacagtt
caactttcggatcctcctaaactagcgaaacaatacaaacacaccattgacgttgtggta
gatcgcatcgtaatcaaggagagcatccaccagcgactgaccgattccgtggagaccgca
ctcagactagccgacggccgcttgctcatcgaattcgtagatgtacaggcagattcaccc
gaacgtactcgaacatttagtgaaaaccttgcctgccccaacaatcaccccctgcaggtg
gacactattgagccacgtgccttctccttcaactcgccctttggcgcatgccaggcttgc
gatggtattggttccaggcttgaagttgatgaggatcttttagtacccaacccagatatg
actctgggtgaaggcgctattgctccgtggtcgcagggaaaatctaccaccgagtattgg
ctgcgtcttcttgcaggtctcggcgaagaactcggatttgaccttaacactccgtggaaa
gatcttcctgccaaggttcgcaaagcaattctggagggcaaagattttaaagttgaggtc
tcgtaccgcaaccgttttggacgcgaacgccgctatacctccgggtttgagggtgttaaa
gccaatatcatgcgtaaacatcaagaaactgaatctgattttgcgcgtgatcgctacgaa
caatatatgcgtcaagttgcatgcccggtatgtcacggtgcgcggcttaaccctactatt
ctcagcgtcaaaattgagggtaaatccattgcggatgtaaccgctatgccgcttcgtgcc
gccttagattttatgcgcgccctaaagctgacccctcgcgaggctaagatcgccgaccag
gttctcaaggaactagatgcacgcctgcaattcctcttggacgtaggactcgattacctg
acgttatcacgctctgctggcacgctttcgggcggggaggcccagcgcatacgactggca
acccagattggttccgggctcgttggtgtgctttatgtgttggatgagccctctataggt
ttgcaccagcgcgacaaccgacgtctaatcgataccttgacaaagctacgtgatatggga
aataccctcatcgtagtggaacatgacgaagacacgatgcgggaagccgactggattgtc
gatgttggtccaggtgcgggcgaacacggcggtgaaatcgtccattcgggcacttacaag
gaacttttgtccaataaaaagtcgataaccggtgattatatggcgggtcggcgctctatt
gaagttccaaagaaacgccgcccacatgaccgtaaacgtgtgttaaaggtctatggagct
cgcgagaacaacctcaaaaatgttgatgttaccttccccctaggtgtttttaccgcgatc
acaggcgtatcgggatcgggtaaatcaaccctcgtgaacgatattctctatacctcactg
gcgaataaactcaacggtgcaaaacaggttccaggacggcacaagaaggtagacggtctg
gaacatctggataaggttattcacgttgaccaatcgcctattgggcgtaccccgcggtca
aatcccgcgacgtacaccggtgtattcgaccatattcgtaagctctttgccgagacgaat
gaggctaaagtgcgcggatatacgcccgggcggttctcgttcaacgttaaaggcggtcga
tgcgaagcatgctcgggtgacggcaccctcaagattgagatgaactttttgccggatgtt
tacgtgccttgcgaaacctgccagggaaaacgctataatcgcgaaaccctcgaagtgcat
tacaaaggtaagactatttctgatgtgcttgaaatgccggttgaagaagctgcagaattt
tttgcggccttcaccccgatcgctcggcacttaaacacgctggttgatgtggggcttggc
tacattcgtctagggcagcccgcaaccacgctttcaggtggtgaggcgcagcgcgtgaaa
cttgccgcagagctgcagaagcgttctaacggtcgttcgatctatgtgcttgatgagcct
acaacgggtctgcattttgaggatatccgtaagctcttaactgtgcttcagtctctcgtt
gataagggcaataccgttatcacgattgaacacaaccttgatgtcattaaatgtgccgac
tggattattgatatgggtccggaaggtggcgacggcggaggcaccgtaatcgccgaagga
acgcctgaagacgtcgcacaggttgaggagtctcataccggacgtttcatcaaggaactt
ttggtgtga
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