Rothia dentocariosa: HMPREF0733_12122
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Entry
HMPREF0733_12122 CDS
T01343
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn02024
Quorum sensing
rdn03060
Protein export
rdn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HMPREF0733_12122 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HMPREF0733_12122 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF0733_12122 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rdn02044
]
HMPREF0733_12122 (ffh)
Enzymes [BR:
rdn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HMPREF0733_12122 (ffh)
Secretion system [BR:
rdn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HMPREF0733_12122 (ffh)
Eukaryotic Sec-SRP protein
HMPREF0733_12122 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
nSTAND3
CbiA
cobW
Zeta_toxin
APS_kinase
AAA_16
AAA_18
Thymidylate_kin
AAA_33
6PF2K
NPHP3_N
MobB
TsaE
Motif
Other DBs
NCBI-ProteinID:
ADP41579
UniProt:
E3H3E4
LinkDB
All DBs
Position
complement(2378828..2380414)
Genome browser
AA seq
528 aa
AA seq
DB search
MFNSLSDRLTATFKNLRGKGRLSEADIDATVREIRRALLDADVAVPVVREFAAHIKERAL
GAEVSEALNPSQQIVKIVNEELITILGGQTRRINMAKTGPTIIMLAGLQGAGKTTLAGKL
AKWLKGQGHTPILVASDLQRPNAVTQLKVVGERAGVPVFAPHPGVTSEFDTPTGDPVQVA
RDGVAEARAKLHDVVIVDTAGRLGVDAELMQQARNIRDAIEPQEVLFVIDAMIGQDAVNT
ANAFNEGVDFTGVVLSKLDGDARGGAALSVASVTGKPIMFASTGENVDDFEQFHPDRMAS
RILDMGDVLTLIEQAEATWDKAEADRMAKKFIDQEDFTFDDFLAQMQQIRKLGSMKKLLM
MMPGAAQMRQQLESFDEREIDRVEAIVRSMTPHERVAPKIINGSRRARIAKGSGVTVSEV
NQLMERFAQAQKMMKKLATGKMSGMPGGMQMPGMAAAGGSNRKKNKKNNNKKKAGRSGNP
MKRKQQEAEALAAQKARQGAAFGQQAQQQEDLDLSKMNLPKGFEKFLQ
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaattctctctctgaccgtttgacggcaacctttaaaaacctgcgtggcaagggc
cgcctctctgaggcagacattgacgcaaccgtccgcgaaattcgccgcgccctgctggat
gcggatgtcgccgtgcctgttgtccgtgaattcgctgcacatattaaggagcgcgccctc
ggtgctgaggtctcagaggcactcaacccttcacagcagatcgtcaagattgtaaacgaa
gagcttattaccattttgggtgggcagactcgccgcattaacatggcgaagaccggtccc
accattattatgctggctggtctgcagggggctggtaaaactacgctggcgggtaaactc
gcgaagtggctcaaggggcaggggcatacccccatcctggtggcatctgacttgcagcgc
ccaaacgcggtaacccagctgaaggttgtgggcgagcgcgcgggcgtacccgttttcgcg
ccccacccgggcgtgaccagtgaatttgatacccctactggcgatcctgtgcaggttgca
cgagatggcgttgctgaagcgcgtgcgaagctccatgacgtggtgatcgttgatactgca
ggccgtttgggtgtggatgctgaactcatgcagcaggcgcgtaatatccgcgatgctatt
gagcctcaagaagtcctgttcgtaatcgacgcgatgattggtcaggacgccgtgaatacc
gcaaatgccttcaacgagggtgtggactttaccggcgtagtgctctctaaacttgatggt
gacgcccgtggtggtgcggctctttccgttgcttcggttaccggcaaaccgattatgttc
gcatccacgggtgagaacgtggatgatttcgagcaattccaccccgaccgtatggccagc
cgcattctggatatgggcgatgtgctcaccctgatcgagcaggcagaggccacgtgggat
aaggcagaagccgaccgcatggccaagaaattcatcgatcaggaagacttcacctttgat
gatttcttggcgcagatgcagcagattcgcaagctgggttccatgaagaaacttctcatg
atgatgcccggtgccgcccagatgcgccagcagctagagtcttttgatgaacgcgaaatt
gaccgcgttgaagctattgtacgttcgatgaccccgcatgaacgtgtggcaccgaagatc
attaacggctcacgccgtgcgcgtatcgcgaaaggttcgggcgtgactgtttctgaggtg
aatcagctcatggagcgttttgctcaggcacagaagatgatgaagaagcttgccaccggc
aagatgtctggtatgcccggcggcatgcagatgcccggtatggccgcggctggcggaagt
aaccgtaaaaagaataagaaaaataataacaagaagaaggcgggtcgctcaggcaacccc
atgaagcgtaagcaacaagaggcagaggcacttgccgctcagaaggcacgccagggcgcg
gctttcgggcagcaggcgcagcagcaagaagatcttgatctttcgaagatgaatctgccg
aagggctttgagaagttcctacagtag
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