Rothia dentocariosa: HMPREF0733_12162
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Entry
HMPREF0733_12162 CDS
T01343
Name
(GenBank) AMP-binding enzyme
KO
K02364
L-serine---[L-seryl-carrier protein] ligase [EC:
6.3.2.14
6.2.1.72
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn01053
Biosynthesis of siderophore group nonribosomal peptides
rdn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
01053 Biosynthesis of siderophore group nonribosomal peptides
HMPREF0733_12162
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
rdn01008
]
HMPREF0733_12162
Enzymes [BR:
rdn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.72 L-serine---[L-seryl-carrier protein] ligase
HMPREF0733_12162
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.14 enterobactin synthase
HMPREF0733_12162
Polyketide biosynthesis proteins [BR:
rdn01008
]
Nonribosomal peptide synthetase (NRPS)
Iterative NRPS
Enterobactin synthetase
HMPREF0733_12162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
Thioesterase
PP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ADP41619
UniProt:
E3H3Q0
LinkDB
All DBs
Position
complement(2434944..2439176)
Genome browser
AA seq
1410 aa
AA seq
DB search
MSITEHSGSKHDWIPLTKSAQGIYLAAIIDPKNPCYNTAEIMECPPETNLDYLREAFIQL
YRENEGFRVQTRVQTGRPEQRVIPLDEFLTNLEVLPVISLQIQEETEEQNPVPAAVRGWA
SELISEPLRTDAGVTVRSAVTYYGGKLWVYHSFSHVVADGFAAFNGLSRVAAIYRALSAG
KPLPTVKRASLMELLRADHAAEHAREEDLALWTSEQVEVLSQPDTSLAARSASPAPQALR
EVLTLPDKLQRDMLEIGKMYGTSWPVTVTGAVGSYLARIGVHRSAAFGVPQMNRIFGAQV
PAETRALGKTSAQTGTTAVNVLPVQVSGMGSIAQALDSVKNQYARNASHPLARQEDLERL
AQSNDSRLFGAQINVIPFDAALPLGAPTENAPASVGYIHNISAGPVADMTITLRGIPGRG
HTISVELDANPNLYTREHVEFHARHLQNWLESWAQAALEERSMDTLTTALPHEVELLESF
NATAHPIEYKTLLQRFQDALTRYPNEPALYACAPDEDGTLSPQSPQAYEFSQVLTYHELD
ARARALAKAMLEAGVCPGTAVGLRFHRGLEQYIALYAALYAGFVYVPILPDLPAERVSSM
MEDAQCSALVYGSGLSPIAEAELKPANTQSLCGLQQLEFTSLTDPVGEPLNLVDVPEAKT
FPGIGTALDDTAYILFTSGSTGRPKGVAISHRSIDNRLRWQQSQIPVGASTQDRAGDRIL
HKTPISFDVHVWELYWPLQEGAAVVIAAPDGHRDPAYLARVIAEQNVTCLHFVPTMLTAF
LEAPSAKRTLAEAGFGSGEQQRHVRYLICSGEALQKDQILSAHNIMGVYPLNLYGPTEAA
VDVTFWDSSQNPECSTVPIGQPVWNTQTRILDQALQPIPPGFVGELYLSGAQLAAGYQNN
PEATAQAFILDNATGERLYRTGDLAEWNLTATNQEPGTLAKNPRGVILYRGRTDHQVKLH
GQRLELGDIETTLSHVEGVHSAVVLLYTKTPEPALTAFLEIGDVSETERNRIVAQARQHC
ENTLPDYMVPRLWHTTAQFPVSPSGKTDRKNLAQIEFTFDTNTADGPHGLLEQQISEIIA
GVLGRSQFGVTEDFLAAGGNSLAALSVIAKIEENLGKMLSIGALFANPTVKGIAAALNED
SPDIEFAPVLPLREADSTDSATSKNTVPLFILPPAGGLGWCYAAYLPHIPGHPSVYALQH
EAFTNPNAGYAQSLRELAEGYLARIRETLEERQLPSQFSLMGWSVGGTAAVEVAALAETA
GYDVQQVTLLDAYPVEQWQGIPEPDEQESFRALLRMGGLPEVSAQTVLDLPQTLERLRDA
GSAMGYLPEDKLEVCLESMRASAALMRGSNHLNFGGKVVLIGVSHDDQPYLDAHGWELHV
GSFRTVTLKNGTHPDLVNPERIPEIIAEAF
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaccgagcatagtgggtccaaacatgactggattcccctgaccaaaagcgct
caaggtatttatcttgccgctattatcgatcccaaaaatccctgctataacacggcagag
atcatggagtgcccgcccgagacgaatcttgattacctgcgtgaggcatttattcagctc
tatcgtgaaaatgaaggtttccgggtgcagacgcgcgtgcagactggacgccctgagcaa
cgagtcataccacttgatgagtttttgactaatcttgaggtacttccggtaatttccctc
cagattcaggaagaaacggaagaacagaatcctgttccggcagcggtgcgtggctgggca
tccgagctgatcagcgaaccattgaggaccgatgcgggtgttacggtacgctccgctgtc
acatactacgggggtaaactctgggtttaccacagctttagccatgtggtggcagacggt
tttgcggcgtttaacggtctatctcgcgtagcagctatctatcgtgcattgagcgctgga
aaacctctgcctactgttaaacgcgcctctctaatggagcttcttcgggctgatcacgct
gccgaacatgcccgagaagaggacctggccttgtggacttctgagcaagtggaagtactt
agccaacccgatacatcgctggcagcacgaagtgcatcaccggcaccacaggccttgcgt
gaggtactgaccctgcctgataaattacagcgagatatgctggaaattggcaaaatgtac
ggaacctcctggcccgttactgtaaccggtgccgtagggtcttatctggcccgtattggt
gtgcatagaagcgctgcttttggtgtaccccagatgaaccgtatatttggggctcaggtt
cccgcagaaacccgtgctctcggcaagaccagcgctcagactggaaccaccgccgtgaac
gtgcttcctgtacaggtttcaggtatgggaagtattgcacaggcactcgatagcgtaaag
aaccagtatgcacgaaacgcctcacatccgcttgctcgacaagaagacctagaacgttta
gcgcagtccaatgacagccgcctctttggcgcccagatcaatgttataccgtttgatgcc
gctttaccgctaggcgcacctaccgaaaacgcgcctgcttctgtgggatatattcataac
atatctgcggggccagttgcggatatgaccattaccctgcgaggcatacccgggcgcggt
cacacaatttctgtggagcttgatgccaacccgaacctgtatacccgcgaacacgtagaa
tttcacgcccggcacctgcaaaattggttggaatcttgggctcaggctgcccttgaggag
cggtcgatggataccctgacgactgcgttaccgcatgaagtagagctgctggaatcgttt
aacgctaccgcacatccgatagagtataaaactttgcttcagcgttttcaggatgcgctc
acacgctacccgaacgaacccgcactctacgcctgcgcgccggacgaggacggtacgttg
tccccgcaatctccgcaggcctatgagttttcgcaggtactcacgtatcacgagctggat
gcgcgagcccgcgccctagcaaaggcgatgctggaagctggcgtgtgccctggaactgct
gtaggcctacgttttcatcgaggacttgaacaatatatcgccttatatgcggcgctctat
gcagggtttgtctatgtgccgattttgccggatctgccggccgaacgtgtgagctccatg
atggaagatgcgcagtgttcggcgcttgtgtatggttccgggctgagtcctattgcagag
gccgagttaaaaccggcgaatacgcagagtttgtgcgggctgcagcaacttgaatttact
tccttgactgatcctgtcggagaacctctaaaccttgtagatgttcccgaggcaaaaaca
ttcccgggtatcggcacagcactggatgataccgcgtatatcttgtttacctcgggttcg
acagggcgacccaaaggtgttgcgattagtcatcgttccattgataaccggttacgttgg
cagcagtcacagattccggtcggcgcatccacacaagaccgcgcgggggaccgcatctta
cataaaacacctatctcgtttgatgttcatgtgtgggagctttattggccgcttcaggaa
ggggcagccgtcgttattgccgctcctgatgggcaccgggatccggcctacctggcgcgt
gttatcgccgaacagaacgttacctgtctgcatttcgtacccacgatgcttaccgccttc
ttggaggccccttccgcaaaacgtaccttagccgaagcaggttttggatcgggggagcag
caacgccatgtgcgctatcttatctgctcgggcgaggcacttcagaaggatcagattctc
agcgcgcataatattatgggtgtttaccctttaaatctttatgggcctacggaagccgcc
gtcgatgttaccttctgggatagctcccaaaacccagagtgcagtactgttcctatcggg
cagcccgtttggaacacccaaacccgtattctcgaccaggctttacagccgataccgccc
ggattcgtaggggaactctacctttcgggtgcacagcttgctgcggggtatcagaacaat
cccgaggcaactgcacaagcctttatcctggacaacgccacaggggagcgactttaccgc
actggcgatcttgccgagtggaacctcaccgccacaaaccaggaacccggcaccttggcc
aaaaaccctcgcggagtcatcctctaccgtggtcgtaccgatcaccaagtaaaattacat
gggcaacgtctagagcttggcgatatcgaaactacgctctcccacgttgagggagtccat
agcgccgtcgttttgctctacacgaagacgcccgaacctgctctcacggcgttcctagag
ataggtgacgtttctgaaacagaacgcaaccgtatcgttgctcaggctcgccaacattgt
gagaacaccttgccggactatatggtaccgcgcctatggcacaccacggctcagttcccg
gttagcccctcaggcaagacagatcgcaaaaacctggcacagatcgagtttacctttgat
accaacaccgcagacggcccccatggacttttagaacagcaaattagcgagattatcgcg
ggtgtgctgggacgctcacaattcggcgtaaccgaagacttcttagcagcaggtggtaac
tccctcgcggcactttccgtcattgccaagattgaagaaaaccttggaaagatgctcagt
attggtgccctcttcgctaatcccacggtcaaggggatcgctgcggccttgaacgaggat
tctcctgatatcgagttcgccccggttctgcctctgcgtgaggcggactcgacggactcc
gcaacatcgaaaaataccgtaccgctctttatcctgccgcccgccggcggtctgggatgg
tgctatgccgcctacctgccccacatacccgggcatccgtcggtttacgcactgcaacat
gaggcattcacgaacccaaatgctggctacgcccagagccttcgtgaactcgccgagggg
tatcttgcgcgtattcgtgagacccttgaggaacgtcagcttccatcacaattttccctg
atgggctggtccgttggcggtactgccgccgtcgaggtagccgcgcttgccgagactgcc
ggttacgatgtacaacaggttacgcttctggatgcataccccgtcgaacagtggcagggg
attcctgaaccggacgagcaagagagctttcgtgccctcttacgtatgggcggtcttccc
gaagtatcggcgcagaccgttcttgacttgccacagacgctcgaacgactgcgagatgcc
gggtcggctatgggatatctacccgaagacaagctagaagtatgtttggaatctatgcgt
gcctctgccgcccttatgcgcggctcgaaccaccttaactttggcggaaaagtcgtattg
attggagtgagccatgacgatcaaccctatctggatgcgcacggctgggagcttcatgtg
ggctcgttccgtaccgtcacgttgaagaacggtacccatcccgatctggtgaacccggag
cgcattcctgaaattattgcagaagccttctaa
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