Rothia dentocariosa: HMPREF0733_12195
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Entry
HMPREF0733_12195 CDS
T01343
Name
(GenBank) efflux ABC transporter, permease protein
KO
K02004
putative ABC transport system permease protein
Organism
rdn
Rothia dentocariosa
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rdn02000
]
HMPREF0733_12195
Transporters [BR:
rdn02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
HMPREF0733_12195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsX
DAD
Motif
Other DBs
NCBI-ProteinID:
ADP41652
UniProt:
E3H412
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Position
2475303..2478029
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AA seq
908 aa
AA seq
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MAATLNTVARANIRSSKKKYILTGIGIAISSFFISAVLMLTASLQATMDATIGDVYANSE
NMVVSAGVMDQDNQNSTAKFPMSNDTVKKIQESPEVSSSWILYTFSGTYGADKEKVAYGS
APPSKDLSPFDIEGNLPSTDTELLVAKSFAEKHNLKIGDKVTMPNIVTSATDKDSAKDTE
YTLTATFNTGISDSQMSDNVFIGGTGLADTARQLAEEEGGIVSDPAKPMAPQAFIKLKNN
TQDSRDALQKELNTGDKNTTPKVLSNTQMIDHLKKQFSTLFNSLNTILIAFAILALLVSS
FVISNTFAVLVGQRVRELALLRTLGARGGSLVRMLLIESLIIGVFFSVIGSGLVYAVGGI
LNAMFSSFIVNFSPTAFIAGVLMCTAVTVLASLIPARTALSISPISAMSASTSQAVKKPS
VLGGIFGVLSALAGVIIAIAAIGNKDGGSAISSVLLACLFLGIAVFLLTPWVLIPLVRFF
GVALRGQTGKLALANSLRSPKRTVSTGRAVLVGTLVISAVLTSHSVMSASIAQEIDRISP
ISAYAPFGESTTTNGSASVTKAHEVADKIRGTKNVEAVSVGSAAGVIEYTAKPDNADSAN
LKDNVIALSNDDLHKVATGESGTNLKNDEVLVPQDIWDLGKFDNNTRLKVSGPLGEIELK
PVKANTKEPFFVVSPETGAQVQNASDPQAASNQALPDDPAAQEALMKAAQENPALARSFA
ARGTATMVLVRASTPLSSSDNTELQGELAKANNGTDFQGGLQIRKNNDQMLTIMLSGALI
LLALAIVIAIIGVANTMTLSVNERRRENAMLRSLGLSRKQLRRMVSTEAVMITLGALAMG
IVSGVGIGLVLSQVLVHATRESMAMAVVLPVSGLVLVLIVGIIAAFAASAIPAFRSARQS
PVEGLSSH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
ttggctgcaacgcttaatacggtggcgcgggcaaatatccgctcctccaagaagaaatac
attctcacgggtattggtatcgccatttcatcgttcttcatctcggcggtgctgatgctt
accgcatcgcttcaggccacgatggatgcgactatcggtgatgtctacgctaactccgag
aacatggtggtctctgcgggtgtcatggaccaggataatcagaactcaaccgctaagttc
ccgatgtccaatgacacggttaagaagattcaggaatctcctgaggttagctcatcctgg
attctatacactttttccggcacctacggagccgataaggagaaggtagcatacggttct
gcgccaccgtcaaaggacctttcaccctttgatattgaggggaatctcccgtccacagac
accgaactcctggtcgctaagagtttcgccgagaaacacaacctgaaaattggcgataag
gtaaccatgcccaatatcgtcacctcagccaccgataaggatagcgcgaaagacaccgag
tacaccctcacagctacctttaacaccggtatctcagattcacagatgagcgacaacgtt
tttattggtggcaccggtcttgcggataccgcgcgtcagcttgcagaggaagagggcggg
atcgtctcagaccccgctaaacccatggcgcctcaggcgttcattaagctcaagaacaat
actcaggactcgcgtgacgcgctgcagaaagaactgaacaccggtgataaaaacaccacc
cccaaggtgctctctaacacgcagatgatagatcaccttaagaaacagttctcaacgctc
ttcaactcgctgaataccattcttatcgccttcgcaattctggctctgttggtttcttcg
ttcgtcatttcgaacaccttcgcggtgctggtggggcagcgtgtacgcgaactcgccctg
ctgcgtactctcggtgcccgcggtggttcgctggtgcggatgctcctcatagaatcacta
ataattggggtcttcttctcagtcatcggttcaggactggtatacgcggtcggtggcatt
ctaaacgcgatgttcagctcgttcatcgtcaatttctcccccacggcgtttattgcaggc
gtactcatgtgcaccgctgtgaccgtactcgcttcacttataccggcgcgcaccgcactg
agtatttcccctattagtgccatgagcgcaagcacaagccaggcggtcaagaaacctagc
gttttaggaggaatcttcggtgttctctccgctcttgcaggcgttattatcgctatcgcg
gctatagggaataaagacggcggatccgctatctcttccgtactgctggcatgcctcttc
ctcggcatagcagtctttcttctcaccccgtgggttctcatccctctggttcgttttttc
ggcgtagctctgcgcgggcaaacgggtaaactggcgttagcaaattccttgcgctcaccc
aaacgcacggtttccactgggcgagccgtgctggtaggaaccttggttatttccgctgtt
ctcaccagccactcagtgatgagcgcctccattgcccaagagattgataggatatcgccg
atttcggcatacgctcctttcggtgaatctaccacaactaacggcagcgcaagcgtgaca
aaggctcacgaagttgctgataagatcaggggcacgaagaatgttgaggctgtcagcgtc
ggttcggctgcgggcgttatcgaatacacagcaaaacccgataacgcagactccgccaat
ctcaaagacaatgtaatcgcgcttagcaacgatgatctgcacaaggtagcaaccggagaa
tcaggtaccaatttaaagaatgatgaggtactcgtcccccaggatatttgggatctgggt
aagttcgataacaacactcgtcttaaggtcagcggccctcttggcgagattgagctcaaa
cccgtcaaggcaaacactaaggaaccattcttcgtggtatcaccggaaaccggtgcccag
gtacagaatgcatctgatccgcaggccgctagtaatcaggcattgccagacgatcccgcc
gcccaagaagcgctcatgaaagcggctcaggaaaaccccgccttggcgcgtagtttcgca
gcacgcggtacagcaaccatggttctggtgcgggcaagcactccactgtcatcaagcgat
aataccgagcttcaaggggagcttgccaaggcaaacaacggaaccgattttcaaggtggt
cttcagattcgcaagaataatgaccaaatgctgactattatgctcagtggtgccttgatc
ctgctggcactggctattgtgatcgccattatcggtgtggcgaatactatgaccctatcg
gtgaacgaacgtcgcagggagaatgcgatgctccgctcgctgggcctgtcccgcaagcag
ctgcggcgtatggtttcgaccgaggctgtcatgattactctcggcgcgttggcgatgggt
atcgtttcgggtgtgggtataggccttgtactttctcaagtactggtacacgctactcgc
gagtccatggcgatggcagtagttctacctgtcagcggtctggttctcgtgctcatcgtg
ggtatcatcgctgcgttcgcggcatcagctatcccagccttccggtcggcgcgacaatcc
ccggtagaggggctgagttcccactaa
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