Rothia dentocariosa: HMPREF0733_12214
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Entry
HMPREF0733_12214 CDS
T01343
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rdn
Rothia dentocariosa
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdn03400
]
HMPREF0733_12214 (sbcD)
DNA repair and recombination proteins [BR:
rdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF0733_12214 (sbcD)
Archaeal homologous recombinant proteins
HMPREF0733_12214 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ADP41671
UniProt:
E3H431
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All DBs
Position
complement(2500275..2501462)
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AA seq
395 aa
AA seq
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MKILHTSDWHLGRTFHRHSLHEWHQRFIDELIDYATAEKIDVLLISGDVYDSAHPSAETT
ELLGKTLDRLALAGIQVVLSAGNHDSARRLGYGAGTLARQGIYPVTTLKETFEPVELTRD
DIRVRIYAVPYLNPRYYGRQLDVEPTHAAVLGEVCTRIREDNEKRNAGENPADFTIVMAH
ATVSEHGDFNESVRSSSERNISVGGVDWVPAALFEGFDYMALGHIHRRYPVTDRVRYSGS
PLPFSFSEEANKNGAYLLNLTARDGGMELQVESHEWRTRLPLKTLTGTFDELMESDEFSP
YETEYFCRIILRDDKQPVGTLDELRKRYENIASFVFEPLHQQPRANTRPRITETTNPAHV
CEEFYATVRAHPMEAAETRALEHIVDEVISSGRSA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctgcacacctccgactggcatttagggcgtaccttccaccggcacagcctg
cacgaatggcatcaacggttcatcgatgaacttatcgactatgcgactgccgaaaagatt
gatgtgctccttattagcggagacgtgtacgatagcgcccaccccagtgccgaaaccacc
gagcttcttggcaagactttagaccgtctggcgctcgcgggaattcaggtagttctgagc
gcgggaaatcatgattccgctcgtaggttagggtatggggcaggtactttagcgcggcag
ggtatataccctgtgacgactttgaaggaaacatttgaaccggtagagctcacccgggac
gatatacgagtgcgtatttatgccgtgccttacctaaacccacgttattatgggcgtcag
cttgatgttgagcccacccatgcagccgtgctgggagaggtctgcacacgaattcgagaa
gacaatgagaaacggaacgcaggggagaaccccgcagatttcaccattgtcatggcccat
gccaccgtgagtgagcacggtgacttcaatgaatctgtgcgttcttcttcggaacgaaat
atcagcgtaggcggcgtggactgggtgccagctgcgctcttcgagggattcgattacatg
gcattaggacatattcaccgccgctacccggtgacggatcgtgtacgatacagcggctcg
ccgctacctttttccttcagcgaagaagctaataagaacggagcctatttactgaacctc
acagcacgcgacgggggcatggaactgcaggtcgaatcccatgaatggcgcactcggctg
cccctcaagaccctgacgggaactttcgatgaactgatggaaagcgacgaattctcgccc
tacgaaaccgagtatttttgccgtattatcctgcgcgatgataagcagccggtaggtact
ctcgacgagctccgtaaacgatatgagaatattgcctcgttcgtttttgagcctctgcat
caacaaccgcgcgcaaacactcgcccgcgcatcaccgaaaccactaacccggcgcatgtg
tgcgaggaattctacgctactgtgcgggcgcatccgatggaggcggcagaaacccgagcc
cttgaacatattgttgatgaggttatcagcagcgggaggtcagcatga
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