Roseateles depolymerans: RD2015_1241
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Entry
RD2015_1241 CDS
T04166
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RD2015_1241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdp03400
]
RD2015_1241
Enzymes [BR:
rdp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
RD2015_1241
DNA repair and recombination proteins [BR:
rdp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RD2015_1241
RecFOR pathway proteins
RD2015_1241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
ALV05732
UniProt:
A0A0U3MUX5
LinkDB
All DBs
Position
1426072..1426620
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AA seq
182 aa
AA seq
DB search
MRILGIDPGLQTTGFGVIDAEGPRLSYVASGTIKTSSIATGDLPGRIKVLYEGVREVVAR
YQPQCAAVEIVFVNVNPQSTLLLGQARGAALTALVSCDLHVSEYTALQMKKAVVGHGHAK
KEQIQLMVQRLLSLPGEPGKDAADALGLAIMHAHARVSFEAMSRSTTLERRQHAQFRKGR
TY
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctcggcatcgaccccggcctgcagaccacaggctttggcgtcattgacgcg
gaaggcccgcgcctgtcgtatgtggccagcggcaccatcaagaccagcagcatcgccacc
ggcgacctgccgggacgcatcaaggtgctgtacgaaggcgtgcgggaagtggtggcccgt
taccagccgcagtgcgcggcggtggagatcgtgttcgtcaacgtgaacccgcagtccacg
ctgctgctggggcaggcccgtggggcggcattgacggcgctggtgtcctgcgacctgcat
gtgtcggaatacaccgcgctgcagatgaagaaggcggtggtgggccacggccatgccaag
aaggaacagatccagctgatggtgcagcggctgctctcactgccgggcgaacccggcaag
gacgccgcggacgcgctgggcctggccatcatgcatgcgcatgcccgcgtgagcttcgag
gcgatgagccgcagcacgacgctggagcggcgtcagcatgcgcagttccgcaaggggcgg
acgtactga
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