KEGG   Roseateles depolymerans: RD2015_1652
Entry
RD2015_1652       CDS       T04166                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rdp  Roseateles depolymerans
Pathway
rdp00300  Lysine biosynthesis
rdp00470  D-Amino acid metabolism
rdp01100  Metabolic pathways
rdp01110  Biosynthesis of secondary metabolites
rdp01120  Microbial metabolism in diverse environments
rdp01230  Biosynthesis of amino acids
Module
rdp_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rdp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RD2015_1652
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RD2015_1652
Enzymes [BR:rdp01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     RD2015_1652
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC GTP_EFTU_D4
Other DBs
NCBI-ProteinID: ALV06136
UniProt: A0A0U3CBL3
LinkDB
Position
1936712..1937974
AA seq 420 aa
MPQALTPDRARFLQALTQRFGTPLWVYDAEVIRDRAAALQPFDVVRFAQKACSNTHVLRL
MRSLGVKVDAVSRGEVLRALTAGYTVGTGADAVHSDIVFTADLLDRDTLRLVAEHQVPVN
AGSIDMLGQLGAVSPGHPVWLRLNPGFGHGHSNKTNTGGEHSKHGIWHEQLPQALAAIRT
HGLRLIGLHMHIGSGVDYGHLAQVCGAMVSLVGQVRDAGMDLSAISAGGGLSIPYKAGED
RIDPAHYFSLWDTARQQAQAVIGHALSLEIEPGRYLVAESGMLLAEVRAVKQQGTQHFLL
VDAGFNELMRPAMYGSFHAMDLIPADGATRPTQPTVVAGPLCESGDVFTQGDGGVVLTRE
LPQAQVGDLLVIHDTGAYGASMSSNYNSRPLIAEVMVEGGEARLIRRRQTVEELLALEEI
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgccgcaagccctcactcccgaccgcgcccgtttcctccaggcgctgacccagcgcttc
ggcaccccgctgtgggtctatgacgccgaagtcatccgcgaccgggcagccgccctccag
ccattcgacgtggtgcgcttcgcccagaaagcctgctccaacacccacgtgctgcgcctg
atgcgcagcctgggcgtgaaggtagacgccgtttcgcgcggcgaagtcctgcgggccctg
acggcgggctacaccgtgggcacgggcgcggacgcggtccactcggacatcgtcttcacc
gccgacctgctggaccgcgacaccctgcgcctggtggccgagcaccaggtgccggtcaat
gcgggctccatcgacatgctgggccaactgggcgcggtctcccccggtcatcccgtctgg
ctgcggctgaaccccggcttcggccacggccacagcaacaagaccaacaccggcggcgag
cacagcaagcacggcatctggcacgagcagttgccgcaggcgctggcggccatccgcacc
catgggctgcgcctcatcggcctgcacatgcacattggctcgggcgtggactacgggcat
ctggcgcaggtctgcggcgcgatggtgtcgctggtcgggcaggtgcgggacgccggcatg
gacctcagcgccatttcggcgggcggcggcctgtcgattccctacaaggcgggcgaggac
cggatcgacccggcccactatttcagcctctgggacaccgcccggcagcaagcgcaggcg
gtgatcggccacgcgctgtcgctggaaatcgagccgggccggtacctggtggcggaatcc
ggcatgctgctggcggaggtccgtgccgtcaagcagcaggggacgcagcatttcctgctg
gtggatgccggcttcaacgaactgatgcggcccgccatgtatggcagcttccatgcgatg
gacctgattcccgccgacggcgccactcgcccgacgcagccgacggtcgtcgccggcccg
ctgtgcgaaagcggcgacgtgttcacccagggcgacggcggcgtggtgctcacgcgcgaa
ctgccgcaggcgcaggtgggcgacctgctggtgatccatgacacgggcgcctatggcgcg
tccatgtccagcaactacaacagccgcccgctgatcgccgaggtgatggtggagggcggc
gaggcccgcctgatccgccggcgccaaacggtggaggagttgctggcgctggaagagatc
tga

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