Roseateles depolymerans: RD2015_1652
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Entry
RD2015_1652 CDS
T04166
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp00300
Lysine biosynthesis
rdp00470
D-Amino acid metabolism
rdp01100
Metabolic pathways
rdp01110
Biosynthesis of secondary metabolites
rdp01120
Microbial metabolism in diverse environments
rdp01230
Biosynthesis of amino acids
Module
rdp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RD2015_1652
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RD2015_1652
Enzymes [BR:
rdp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RD2015_1652
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
ALV06136
UniProt:
A0A0U3CBL3
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All DBs
Position
1936712..1937974
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AA seq
420 aa
AA seq
DB search
MPQALTPDRARFLQALTQRFGTPLWVYDAEVIRDRAAALQPFDVVRFAQKACSNTHVLRL
MRSLGVKVDAVSRGEVLRALTAGYTVGTGADAVHSDIVFTADLLDRDTLRLVAEHQVPVN
AGSIDMLGQLGAVSPGHPVWLRLNPGFGHGHSNKTNTGGEHSKHGIWHEQLPQALAAIRT
HGLRLIGLHMHIGSGVDYGHLAQVCGAMVSLVGQVRDAGMDLSAISAGGGLSIPYKAGED
RIDPAHYFSLWDTARQQAQAVIGHALSLEIEPGRYLVAESGMLLAEVRAVKQQGTQHFLL
VDAGFNELMRPAMYGSFHAMDLIPADGATRPTQPTVVAGPLCESGDVFTQGDGGVVLTRE
LPQAQVGDLLVIHDTGAYGASMSSNYNSRPLIAEVMVEGGEARLIRRRQTVEELLALEEI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagccctcactcccgaccgcgcccgtttcctccaggcgctgacccagcgcttc
ggcaccccgctgtgggtctatgacgccgaagtcatccgcgaccgggcagccgccctccag
ccattcgacgtggtgcgcttcgcccagaaagcctgctccaacacccacgtgctgcgcctg
atgcgcagcctgggcgtgaaggtagacgccgtttcgcgcggcgaagtcctgcgggccctg
acggcgggctacaccgtgggcacgggcgcggacgcggtccactcggacatcgtcttcacc
gccgacctgctggaccgcgacaccctgcgcctggtggccgagcaccaggtgccggtcaat
gcgggctccatcgacatgctgggccaactgggcgcggtctcccccggtcatcccgtctgg
ctgcggctgaaccccggcttcggccacggccacagcaacaagaccaacaccggcggcgag
cacagcaagcacggcatctggcacgagcagttgccgcaggcgctggcggccatccgcacc
catgggctgcgcctcatcggcctgcacatgcacattggctcgggcgtggactacgggcat
ctggcgcaggtctgcggcgcgatggtgtcgctggtcgggcaggtgcgggacgccggcatg
gacctcagcgccatttcggcgggcggcggcctgtcgattccctacaaggcgggcgaggac
cggatcgacccggcccactatttcagcctctgggacaccgcccggcagcaagcgcaggcg
gtgatcggccacgcgctgtcgctggaaatcgagccgggccggtacctggtggcggaatcc
ggcatgctgctggcggaggtccgtgccgtcaagcagcaggggacgcagcatttcctgctg
gtggatgccggcttcaacgaactgatgcggcccgccatgtatggcagcttccatgcgatg
gacctgattcccgccgacggcgccactcgcccgacgcagccgacggtcgtcgccggcccg
ctgtgcgaaagcggcgacgtgttcacccagggcgacggcggcgtggtgctcacgcgcgaa
ctgccgcaggcgcaggtgggcgacctgctggtgatccatgacacgggcgcctatggcgcg
tccatgtccagcaactacaacagccgcccgctgatcgccgaggtgatggtggagggcggc
gaggcccgcctgatccgccggcgccaaacggtggaggagttgctggcgctggaagagatc
tga
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