Roseateles depolymerans: RD2015_1858
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Entry
RD2015_1858 CDS
T04166
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rdp03032
]
RD2015_1858
03036 Chromosome and associated proteins [BR:
rdp03036
]
RD2015_1858
03400 DNA repair and recombination proteins [BR:
rdp03400
]
RD2015_1858
DNA replication proteins [BR:
rdp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RD2015_1858
Chromosome and associated proteins [BR:
rdp03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RD2015_1858
DNA repair and recombination proteins [BR:
rdp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RD2015_1858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ALV06337
UniProt:
A0A0U2U1Z5
LinkDB
All DBs
Position
complement(2189932..2190240)
Genome browser
AA seq
102 aa
AA seq
DB search
MTRSDLVAHLSERFSQLTQRDTEFAVKTILDAMSDALARGHRIEIRGFGSFSINRRPPRT
GRNPRSGEQVLIPEKLVPHFKPGKALREAVDAQLPADTSPSE
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgacccgatccgacctggtggcccacctgtccgagcgcttcagccagctcacccaacgt
gacacggaattcgcggtcaagaccatcctcgacgccatgtccgatgccctggcccgcggc
caccgcatcgagatccgcggcttcggcagcttctccatcaaccgtcgccctccccgcacc
ggacgcaatccccgcagcggcgaacaggtgctgatccccgagaagctcgtgccccacttc
aagcccggcaaagccctgcgcgaagccgtcgatgcacagctgcccgccgacacaagccct
tcggaataa
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integrated database retrieval system
