Roseateles depolymerans: RD2015_1985
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Entry
RD2015_1985 CDS
T04166
Name
(GenBank) catabolite gene activator protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rdp
Roseateles depolymerans
Pathway
rdp02020
Two-component system
rdp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD2015_1985
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD2015_1985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rdp03000
]
RD2015_1985
Transcription factors [BR:
rdp03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RD2015_1985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HTH_24
HVO_A0261_N
TrmB
DUF7343
MarR
HTH_Cmi2_C
Rrf2
HTH_69
FeoC
HTH_11
RepL
Motif
Other DBs
NCBI-ProteinID:
ALV06461
UniProt:
A0A0U3MCT7
LinkDB
All DBs
Position
2331592..2332260
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AA seq
222 aa
AA seq
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MAMLSNLDLIRRVPLFSLLTADQAQSIADSVVKRRFKRGELIVEQGTKSNALFILLNGRA
RVLTADNRGREVILAVLQPGDYVGEMSLIDNEPHSATVRAEVQTDMLVLGRSDFARGLPE
PSSLAYGILRGLVARLRNADRQIESLALLDVYGRVARTLLDMAEEEKGVKIIRGKVSRQD
MAKVVGASREMVSRVMKDLEDKGVIETLENGSVVIKERLQHD
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggccatgttgtccaacctggatctgatccgcagggtccctttgttctccctgttgact
gctgaccaggcccagtccattgcggacagtgtcgtcaagcggcgcttcaagcgtggtgaa
ctgatcgtcgaacaagggacgaagtccaatgccctgttcattctgctcaatgggcgcgca
cgcgtcctgaccgcggacaaccgcggccgcgaggtcatcctggcggtgctccagcccggc
gactatgtgggcgagatgagcctcatcgacaacgaaccgcattcggccaccgtccgggcc
gaggtgcagaccgacatgctcgtgctgggccggtcggacttcgcccgcggcctgccggag
cccagcagcctggcctacggcatcctgcgcggcctggtcgcgcgtctgcgcaatgcggac
cggcagatcgaatcgctggccctgctggacgtctacggtcgcgtggcccgcacgctgctg
gacatggccgaggaagagaagggcgtgaagatcatccgcggcaaggtgtcccgccaggac
atggccaaggtggtgggcgcgtcccgtgaaatggtcagccgggtcatgaaggacctggaa
gacaagggcgtgatcgagaccctggagaacggttccgtggtcatcaaggaacgcctgcaa
cacgattga
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