Roseateles depolymerans: RD2015_2046
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Entry
RD2015_2046 CDS
T04166
Name
(GenBank) Sigma54 specific transcriptional regulator, Fis family
Organism
rdp
Roseateles depolymerans
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_2
HTH_29
AAA
HTH_23
MCM
HTH_30
PIF1
VpsR
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ALV06522
UniProt:
A0A0U3MQG4
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Position
2397806..2399299
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AA seq
497 aa
AA seq
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MTHALIVDDDIDSVATLQELIASEKFTVSVAHTLRDARRHIALQQPDVVLLDLQLPDGNG
MELFSDPQLVANSEVVLITGHASLDTSIQALRLGAADYLVKPINIRQLQGVLSRIMKPAA
LQAEVADLNANLANSGHFGLLWGRTPPMQRIYEQISRVAGTSVSVFINGESGTGKELVAQ
TVHDLSRRRKKPFLAVNCGAISPNLIESEIFGHEKGAFTGADKQHEGFFERASGGTLFLD
ELTEMPLELQVKLLRVLETGRFMRVGSTTTIDADVRVIAASNRPLLQAVQAGKLREDLLY
RLNVFPIEMPPLRERLDDVPLLADHFLKAIAAKEGKNKRFTPRALAQLQTYHWPGNVREL
RNAVQRAYVMAAADVIDEQWLPRPDPAHEAVSALSASAGTFAAVSPALGGQSPAGVVAAP
PVSAPAPAEQSGPSIVMPLGSSMAQVEKAFILATLQHYKHHKEQTAAVLGISLKTLYNRL
KEYAAEDAAAVDNSSAH
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
gtgacccatgccttgatcgtggacgacgacatcgattccgtcgccaccttgcaagaactg
attgcgagcgaaaagttcaccgtctcggtggcccataccctgcgggatgcgcgccggcat
attgcgctgcagcagcccgatgtggtgctgctggaccttcaactgcctgacggcaacggg
atggagctgttctccgacccgcagttggtggccaattccgaagtggtgctgatcaccggc
catgccagcctggatacgtccatccaggcgctgcgcctgggcgcggcggactatctggtc
aagccgatcaacatccgccagttgcagggcgtgctgtcccgcatcatgaagccggcggcg
ctgcaggccgaggtggccgacctcaatgccaacctggccaacagcggccatttcggtttg
ctgtgggggcgcacgccgccgatgcagcgcatctatgagcagatctcgcgggtggccggc
accagcgtctcggtgttcatcaacggcgagagcggcaccggcaaggagctggtcgcgcag
acggtgcatgacctgagccgccgccgcaagaagcctttcctggcggtgaactgcggcgcc
atctcgcccaacctgatcgagagcgaaatcttcggtcacgagaagggcgccttcaccggg
gccgacaagcagcacgaaggtttcttcgaacgcgccagcggcggcacgctgttcctggac
gagctgaccgagatgccgctggagctgcaggtcaagctgctgcgggtgctggagaccggc
cgcttcatgcgggtgggctccaccaccacgatcgatgcggacgtgcgcgtgatcgccgct
tccaatcgcccgctgctgcaggcggtgcaggccggcaagctgcgggaggacttgctctat
cgcttgaacgtcttcccgatcgagatgccgccgctgcgggagcgtctggacgacgttccg
ctgctggccgaccacttcctcaaggccatcgccgccaaggaaggcaagaacaagcgcttc
acgccgcgggcattggcgcagctgcagacctatcactggccgggcaatgtccgggaactg
cgcaatgccgtgcagcgcgcctatgtgatggcggcggccgatgtcatcgacgagcagtgg
ctgccgcgtccggacccggcgcatgaggccgtctctgccctgtccgccagcgccggcacc
tttgcagccgtgtctccggcgctcgggggtcagtccccggcaggcgtggtggccgcaccg
cccgtgtcggctccggcacctgccgagcagtccggcccgtccatcgtcatgcccctgggc
agctcgatggcgcaggtggagaaggccttcatcctggcgacgctgcagcattacaagcat
cacaaggagcagacggcggcggtgctgggcatcagcctcaagacgctctacaaccgcttg
aaggaatacgccgccgaggacgcggccgccgtggacaactcctccgcacactga
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