Roseateles depolymerans: RD2015_213
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Entry
RD2015_213 CDS
T04166
Name
(GenBank) Putative lipoprotein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rdp01011
]
RD2015_213
Enzymes [BR:
rdp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RD2015_213
Peptidoglycan biosynthesis and degradation proteins [BR:
rdp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RD2015_213
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Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
ALV04717
UniProt:
A0A0U3M7Z7
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Position
complement(240343..241614)
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AA seq
423 aa
AA seq
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MFEARPAGQRLAVLTSALLLAACASRAPAPADRSATSALGTPKVTQWPSKDGPEAVVPAD
LDKLPDALPRLESIRKGGPNKPYAVAGQRYQPLTDDDPLVQRGLASWYGRKFHGRPTASG
ELYNMYAMTAAHPTMPIPSYARVRNPKNGKEVIVRINDRGPFHSSRIIDLSYTAALKLDL
LRGVAEVEVERITYEDIRTGAWLRGKEAPAQPGDRTLPQAPLYAAATPNGAPEVTTGAQM
RDTDPAAGTTAGTRGGALRPSPTLPAAGTSRSVATSAATTPVSASAGMVPIPVVALPPGT
DLDSRRDLPASAASAPSTPPTAVAQSDVSASPSPDAAVPAMKLAAAPGFWLQLGAFSRLE
GAETLREQFTRNLDWMAPMLTIFKDKQLHRLQAGPFNSREDARAAADKVRTAMALTPVLV
ERR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagcccgccccgccggccagcgcctggccgtcctgacgagtgccctgttgctg
gccgcctgtgccagccgtgctcctgcccctgccgaccgctccgccacgtcggcgctcggc
actcccaaagtgacccagtggccgtccaaggatggtcccgaagcggtggtgccggccgac
ctggacaagctgccggacgccctgccccgcctcgaaagcatccgcaaaggcggccccaac
aaaccctatgccgtcgccggccaacgctaccagccgctgaccgatgacgacccgctggtg
cagcgcgggctggcgtcctggtatggacgcaagttccatggccggcccaccgccagcggc
gagctctacaacatgtatgcgatgacggccgcgcatccgaccatgccgattccgagctat
gcccgggtgcgcaaccccaaaaacggcaaggaagtcattgtgcggatcaatgaccggggg
ccgtttcacagcagccgcatcatcgacctgagctacaccgccgccctgaagctggacctg
ctgcgcggggtggcggaggtggaggtcgagcgcatcacctatgaggacatccgcaccggc
gcctggctgcgcggcaaggaagcgccggcacagcccggggaccggacccttccgcaggca
ccgctgtatgcggcggcgacgcccaacggggcgcctgaagtcaccacgggtgcccagatg
cgggacacggacccggccgccgggacaacggctggaacacgcggcggtgcgttgcggcca
tccccgacccttcctgcggccggaacctccaggtcggtcgccaccagcgctgcgaccacc
ccggtgagcgccagcgccggcatggtgccgatccccgtggtggccctgccgcccggcacg
gacctggacagccgccgcgacctgcccgcgtccgccgcatcggccccatcaacgccgccc
accgccgtcgcgcagagcgatgtctcggcctcccccagtccagacgccgccgtcccggcc
atgaaactggccgccgcccccggcttctggctgcagctgggcgccttttcccgcctggaa
ggcgcggaaaccctgcgcgagcagttcacccggaacctggactggatggccccgatgctg
accatcttcaaggacaagcagttgcaccgcctccaggccggtcccttcaacagccgggaa
gatgcccgggccgccgccgacaaggtgcgcacggccatggcgctgacgccggtgctggtc
gagcggcgctaa
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